Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 MDE1YJR024C 735 nt10.02□□□□□ -0.81
UFD4P33202 ADY2YCR010C 852 nt10.01□□□□□ -0.81
UFD4P33202 MRPL28YDR462W 444 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)BtG(GCC)B 71 nt10.01□□□□□ -0.81
UFD4P33202 SUF16tG(GCC)C 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)D1tG(GCC)D1 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)D2tG(GCC)D2 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)EtG(GCC)E 71 nt10.01□□□□□ -0.81
UFD4P33202 SUF20tG(GCC)F1 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)F2tG(GCC)F2 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)G1tG(GCC)G1 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)G2tG(GCC)G2 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)J1tG(GCC)J1 71 nt10.01□□□□□ -0.81
UFD4P33202 SUF23tG(GCC)J2 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)MtG(GCC)M 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)O1tG(GCC)O1 71 nt10.01□□□□□ -0.81
UFD4P33202 SUF17tG(GCC)O2 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)P1tG(GCC)P1 71 nt10.01□□□□□ -0.81
UFD4P33202 tG(GCC)P2tG(GCC)P2 71 nt10.01□□□□□ -0.81
UFD4P33202 LDB18YLL049W 540 nt10.01□□□□□ -0.81
UFD4P33202 SEC13YLR208W 894 nt10.01□□□□□ -0.81
UFD4P33202 YRF1-1YDR545W 5391 nt10.01□□□□□ -0.81
UFD4P33202 YRF1-5YLR467W 5391 nt10.01□□□□□ -0.81
UFD4P33202 YRF1-8YOR396W 5391 nt10.01□□□□□ -0.81
UFD4P33202 ADE12YNL220W 1302 nt10.01□□□□□ -0.81
UFD4P33202 YCR041WYCR041W 333 nt9.99□□□□□ -0.81
UFD4P33202 PNP1YLR209C 936 nt9.99□□□□□ -0.81
UFD4P33202 YLL066CYLL066C 3618 nt9.98□□□□□ -0.81
UFD4P33202 YLL067CYLL067C 3618 nt9.98□□□□□ -0.81
UFD4P33202 UGX2YDL169C 672 nt9.98□□□□□ -0.81
UFD4P33202 AIM33YML087C 939 nt9.98□□□□□ -0.81
UFD4P33202 AMD2YDR242W 1650 nt9.98□□□□□ -0.81
UFD4P33202 AQR1YNL065W 1761 nt9.98□□□□□ -0.81
UFD4P33202 YDL119CYDL119C 924 nt9.98□□□□□ -0.81
UFD4P33202 OPI11YPR044C 354 nt9.98□□□□□ -0.81
UFD4P33202 YML012C-AYML012C-A 378 nt9.97□□□□□ -0.81
UFD4P33202 YEL023CYEL023C 2049 nt9.96□□□□□ -0.82
UFD4P33202 IRC11YOR013W 471 nt9.96□□□□□ -0.82
UFD4P33202 YDL022C-AYDL022C-A 249 nt9.95□□□□□ -0.82
UFD4P33202 RPS3YNL178W 723 nt9.94□□□□□ -0.82
UFD4P33202 ERS1YCR075C 783 nt9.93□□□□□ -0.82
UFD4P33202 MTR3YGR158C 753 nt9.92□□□□□ -0.82
UFD4P33202 DAL3YIR032C 588 nt9.92□□□□□ -0.82
UFD4P33202 NUP84YDL116W 2181 nt9.92□□□□□ -0.82
UFD4P33202 YFL013W-AYFL013W-A 804 nt9.91□□□□□ -0.82
UFD4P33202 YNL042W-BYNL042W-B 258 nt9.91□□□□□ -0.82
UFD4P33202 YOR342CYOR342C 960 nt9.91□□□□□ -0.82
UFD4P33202 EDE1YBL047C 4146 nt9.91□□□□□ -0.82
UFD4P33202 CIN4YMR138W 576 nt9.91□□□□□ -0.82
UFD4P33202 ARG1YOL058W 1263 nt9.91□□□□□ -0.82
UFD4P33202 DFR1YOR236W 636 nt9.91□□□□□ -0.82
UFD4P33202 YPL250W-AYPL250W-A 288 nt9.91□□□□□ -0.82
UFD4P33202 LDB16YCL005W 771 nt9.91□□□□□ -0.82
UFD4P33202 FRE5YOR384W 2085 nt9.9□□□□□ -0.82
UFD4P33202 ILV1YER086W 1731 nt9.89□□□□□ -0.83
UFD4P33202 EFM4YIL064W 774 nt9.89□□□□□ -0.83
UFD4P33202 MRP17YKL003C 396 nt9.89□□□□□ -0.83
UFD4P33202 YJL045WYJL045W 1905 nt9.89□□□□□ -0.83
UFD4P33202 BRL1YHR036W 1416 nt9.88□□□□□ -0.83
UFD4P33202 COR1YBL045C 1374 nt9.88□□□□□ -0.83
UFD4P33202 ECM31YBR176W 939 nt9.88□□□□□ -0.83
UFD4P33202 RIX7YLL034C 2514 nt9.86□□□□□ -0.83
UFD4P33202 PXL1YKR090W 2121 nt9.85□□□□□ -0.83
UFD4P33202 DAP1YPL170W 459 nt9.85□□□□□ -0.83
UFD4P33202 HEM1YDR232W 1647 nt9.85□□□□□ -0.83
UFD4P33202 COX20YDR231C 618 nt9.85□□□□□ -0.83
UFD4P33202 SNO4YMR322C 714 nt9.84□□□□□ -0.83
UFD4P33202 HSP33YOR391C 714 nt9.84□□□□□ -0.83
UFD4P33202 HSP32YPL280W 714 nt9.84□□□□□ -0.83
UFD4P33202 RDN5-2RDN5-2 119 nt9.83□□□□□ -0.84
UFD4P33202 RDN5-3RDN5-3 119 nt9.83□□□□□ -0.84
UFD4P33202 RDN5-4RDN5-4 119 nt9.83□□□□□ -0.84
UFD4P33202 RDN5-5RDN5-5 119 nt9.83□□□□□ -0.84
UFD4P33202 MRPL22YNL177C 930 nt9.83□□□□□ -0.84
UFD4P33202 TPO3YPR156C 1869 nt9.83□□□□□ -0.84
UFD4P33202 YDL129WYDL129W 876 nt9.82□□□□□ -0.84
UFD4P33202 DYS1YHR068W 1164 nt9.82□□□□□ -0.84
UFD4P33202 YNL120CYNL120C 486 nt9.82□□□□□ -0.84
UFD4P33202 SSO1YPL232W 873 nt9.82□□□□□ -0.84
UFD4P33202 VMA16YHR026W 642 nt9.81□□□□□ -0.84
UFD4P33202 YDL057WYDL057W 987 nt9.8□□□□□ -0.84
UFD4P33202 MEH1YKR007W 555 nt9.8□□□□□ -0.84
UFD4P33202 ATG12YBR217W 561 nt9.8□□□□□ -0.84
UFD4P33202 PUF3YLL013C 2640 nt9.8□□□□□ -0.84
UFD4P33202 CCC2YDR270W 3015 nt9.8□□□□□ -0.84
UFD4P33202 YNR075C-AYNR075C-A 93 nt9.79□□□□□ -0.84
UFD4P33202 MRK1YDL079C 1506 nt9.79□□□□□ -0.84
UFD4P33202 GGC1YDL198C 903 nt9.79□□□□□ -0.84
UFD4P33202 CCT3YJL014W 1605 nt9.78□□□□□ -0.84
UFD4P33202 YGR022CYGR022C 330 nt9.78□□□□□ -0.84
UFD4P33202 MRPS5YBR251W 924 nt9.78□□□□□ -0.84
UFD4P33202 PAC10YGR078C 600 nt9.77□□□□□ -0.85
UFD4P33202 SYN8YAL014C 768 nt9.77□□□□□ -0.85
UFD4P33202 RGD2YFL047W 2145 nt9.77□□□□□ -0.85
UFD4P33202 AAD15YOL165C 432 nt9.76□□□□□ -0.85
UFD4P33202 ERI1YPL096C-A 207 nt9.76□□□□□ -0.85
UFD4P33202 HSP26YBR072W 645 nt9.76□□□□□ -0.85
UFD4P33202 PYK2YOR347C 1521 nt9.76□□□□□ -0.85
UFD4P33202 ATO2YNR002C 849 nt9.75□□□□□ -0.85
UFD4P33202 ARC35YNR035C 1029 nt9.75□□□□□ -0.85
Retrieved 100 of 7,029 protein–RNA pairs in 39.9 ms