Protein–RNA interactions for Protein: P16403

HIST1H1C, Histone H1.2, humanhuman

Known RBP Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1CP16403 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H1CP16403 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H1CP16403 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
HIST1H1CP16403 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.84■■□□□ 1.09
HIST1H1CP16403 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HIST1H1CP16403 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST1H1CP16403 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.83■■□□□ 1.09
HIST1H1CP16403 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HIST1H1CP16403 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.83■■□□□ 1.09
HIST1H1CP16403 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIST1H1CP16403 AL359258.2-201ENST00000564063 1566 ntBASIC21.82■■□□□ 1.08
HIST1H1CP16403 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H1CP16403 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H1CP16403 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H1CP16403 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
HIST1H1CP16403 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.82■■□□□ 1.08
HIST1H1CP16403 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.82■■□□□ 1.08
HIST1H1CP16403 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H1CP16403 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H1CP16403 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H1CP16403 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST1H1CP16403 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1CP16403 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1CP16403 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
HIST1H1CP16403 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1CP16403 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1CP16403 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
HIST1H1CP16403 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.81■■□□□ 1.08
HIST1H1CP16403 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST1H1CP16403 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H1CP16403 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H1CP16403 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H1CP16403 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H1CP16403 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST1H1CP16403 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.79■■□□□ 1.08
HIST1H1CP16403 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST1H1CP16403 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HIST1H1CP16403 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST1H1CP16403 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.79■■□□□ 1.08
HIST1H1CP16403 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.79■■□□□ 1.08
HIST1H1CP16403 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HIST1H1CP16403 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H1CP16403 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H1CP16403 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H1CP16403 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H1CP16403 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.78■■□□□ 1.08
HIST1H1CP16403 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.78■■□□□ 1.08
HIST1H1CP16403 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HIST1H1CP16403 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H1CP16403 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HIST1H1CP16403 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H1CP16403 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HIST1H1CP16403 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.77■■□□□ 1.08
HIST1H1CP16403 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H1CP16403 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HIST1H1CP16403 AL359504.2-201ENST00000605506 1601 ntBASIC21.77■■□□□ 1.07
HIST1H1CP16403 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
HIST1H1CP16403 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H1CP16403 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H1CP16403 CR559946.2-201ENST00000623684 991 ntBASIC21.76■■□□□ 1.07
HIST1H1CP16403 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST1H1CP16403 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H1CP16403 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H1CP16403 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST1H1CP16403 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
HIST1H1CP16403 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HIST1H1CP16403 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H1CP16403 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.74■■□□□ 1.07
HIST1H1CP16403 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H1CP16403 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.74■■□□□ 1.07
HIST1H1CP16403 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H1CP16403 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
HIST1H1CP16403 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HIST1H1CP16403 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H1CP16403 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
HIST1H1CP16403 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
HIST1H1CP16403 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST1H1CP16403 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIST1H1CP16403 ABHD17AP4-201ENST00000411545 909 ntBASIC21.72■■□□□ 1.07
HIST1H1CP16403 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.72■■□□□ 1.07
HIST1H1CP16403 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
HIST1H1CP16403 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.72■■□□□ 1.07
HIST1H1CP16403 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HIST1H1CP16403 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.71■■□□□ 1.07
HIST1H1CP16403 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H1CP16403 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H1CP16403 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.71■■□□□ 1.07
HIST1H1CP16403 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HIST1H1CP16403 AC096887.2-201ENST00000623443 1957 ntBASIC21.71■■□□□ 1.07
HIST1H1CP16403 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HIST1H1CP16403 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H1CP16403 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIST1H1CP16403 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
HIST1H1CP16403 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
HIST1H1CP16403 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H1CP16403 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.7■■□□□ 1.06
HIST1H1CP16403 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST1H1CP16403 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HIST1H1CP16403 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
HIST1H1CP16403 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms