Protein–RNA interactions for Protein: P0C7T8

TMEM253, Transmembrane protein 253, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253P0C7T8 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TMEM253P0C7T8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.83■■□□□ 1.72
TMEM253P0C7T8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
TMEM253P0C7T8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
TMEM253P0C7T8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.82■■□□□ 1.72
TMEM253P0C7T8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TMEM253P0C7T8 AL359258.2-201ENST00000564063 1566 ntBASIC25.82■■□□□ 1.72
TMEM253P0C7T8 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TMEM253P0C7T8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.82■■□□□ 1.72
TMEM253P0C7T8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TMEM253P0C7T8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TMEM253P0C7T8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.8■■□□□ 1.72
TMEM253P0C7T8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
TMEM253P0C7T8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.79■■□□□ 1.72
TMEM253P0C7T8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.78■■□□□ 1.72
TMEM253P0C7T8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
TMEM253P0C7T8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.78■■□□□ 1.72
TMEM253P0C7T8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.78■■□□□ 1.72
TMEM253P0C7T8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.78■■□□□ 1.72
TMEM253P0C7T8 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMEM253P0C7T8 AL359504.2-201ENST00000605506 1601 ntBASIC25.77■■□□□ 1.72
TMEM253P0C7T8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
TMEM253P0C7T8 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMEM253P0C7T8 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
TMEM253P0C7T8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.76■■□□□ 1.71
TMEM253P0C7T8 CR559946.2-201ENST00000623684 991 ntBASIC25.76■■□□□ 1.71
TMEM253P0C7T8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TMEM253P0C7T8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEM253P0C7T8 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM253P0C7T8 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.75■■□□□ 1.71
TMEM253P0C7T8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM253P0C7T8 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.75■■□□□ 1.71
TMEM253P0C7T8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMEM253P0C7T8 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
TMEM253P0C7T8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.74■■□□□ 1.71
TMEM253P0C7T8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMEM253P0C7T8 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
TMEM253P0C7T8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.73■■□□□ 1.71
TMEM253P0C7T8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC25.73■■□□□ 1.71
TMEM253P0C7T8 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM253P0C7T8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.73■■□□□ 1.71
TMEM253P0C7T8 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM253P0C7T8 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM253P0C7T8 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.73■■□□□ 1.71
TMEM253P0C7T8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEM253P0C7T8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
TMEM253P0C7T8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM253P0C7T8 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
TMEM253P0C7T8 AC096887.2-201ENST00000623443 1957 ntBASIC25.71■■□□□ 1.71
TMEM253P0C7T8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TMEM253P0C7T8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.71■■□□□ 1.71
TMEM253P0C7T8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TMEM253P0C7T8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TMEM253P0C7T8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.7■■□□□ 1.71
TMEM253P0C7T8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
TMEM253P0C7T8 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
TMEM253P0C7T8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TMEM253P0C7T8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.7
TMEM253P0C7T8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.69■■□□□ 1.7
TMEM253P0C7T8 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM253P0C7T8 ABHD17AP4-201ENST00000411545 909 ntBASIC25.68■■□□□ 1.7
TMEM253P0C7T8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM253P0C7T8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.68■■□□□ 1.7
TMEM253P0C7T8 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM253P0C7T8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM253P0C7T8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
TMEM253P0C7T8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.68■■□□□ 1.7
TMEM253P0C7T8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
TMEM253P0C7T8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
TMEM253P0C7T8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMEM253P0C7T8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.67■■□□□ 1.7
TMEM253P0C7T8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMEM253P0C7T8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TMEM253P0C7T8 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TMEM253P0C7T8 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
TMEM253P0C7T8 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.66■■□□□ 1.7
TMEM253P0C7T8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TMEM253P0C7T8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM253P0C7T8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.65■■□□□ 1.7
TMEM253P0C7T8 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM253P0C7T8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms