Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PCP4L1A6NKN8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PCP4L1A6NKN8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
PCP4L1A6NKN8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCP4L1A6NKN8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCP4L1A6NKN8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.34■□□□□ 0.69
PCP4L1A6NKN8 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
PCP4L1A6NKN8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PCP4L1A6NKN8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCP4L1A6NKN8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
PCP4L1A6NKN8 ABCB10P4-201ENST00000566803 2184 ntBASIC19.33■□□□□ 0.69
PCP4L1A6NKN8 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
PCP4L1A6NKN8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PCP4L1A6NKN8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCP4L1A6NKN8 AL391422.3-201ENST00000603791 2761 ntBASIC19.33■□□□□ 0.68
PCP4L1A6NKN8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCP4L1A6NKN8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PCP4L1A6NKN8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.32■□□□□ 0.68
PCP4L1A6NKN8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.32■□□□□ 0.68
PCP4L1A6NKN8 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCP4L1A6NKN8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCP4L1A6NKN8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCP4L1A6NKN8 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCP4L1A6NKN8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCP4L1A6NKN8 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCP4L1A6NKN8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCP4L1A6NKN8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCP4L1A6NKN8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCP4L1A6NKN8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCP4L1A6NKN8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCP4L1A6NKN8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCP4L1A6NKN8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.29■□□□□ 0.68
PCP4L1A6NKN8 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCP4L1A6NKN8 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCP4L1A6NKN8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCP4L1A6NKN8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCP4L1A6NKN8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCP4L1A6NKN8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCP4L1A6NKN8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCP4L1A6NKN8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
PCP4L1A6NKN8 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.27■□□□□ 0.68
PCP4L1A6NKN8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.27■□□□□ 0.67
PCP4L1A6NKN8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
PCP4L1A6NKN8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCP4L1A6NKN8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.26■□□□□ 0.67
PCP4L1A6NKN8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PCP4L1A6NKN8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCP4L1A6NKN8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PCP4L1A6NKN8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCP4L1A6NKN8 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCP4L1A6NKN8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCP4L1A6NKN8 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCP4L1A6NKN8 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCP4L1A6NKN8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.25■□□□□ 0.67
PCP4L1A6NKN8 ERN1-208ENST00000606895 2068 ntBASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCP4L1A6NKN8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PCP4L1A6NKN8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCP4L1A6NKN8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCP4L1A6NKN8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PCP4L1A6NKN8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCP4L1A6NKN8 AC145676.1-201ENST00000514988 2004 ntBASIC19.23■□□□□ 0.67
PCP4L1A6NKN8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCP4L1A6NKN8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCP4L1A6NKN8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PCP4L1A6NKN8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCP4L1A6NKN8 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCP4L1A6NKN8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PCP4L1A6NKN8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCP4L1A6NKN8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PCP4L1A6NKN8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PCP4L1A6NKN8 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PCP4L1A6NKN8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCP4L1A6NKN8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCP4L1A6NKN8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PCP4L1A6NKN8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCP4L1A6NKN8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms