Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
IFT52Q9Y366 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 MIR662-201ENST00000384847 95 ntBASIC16.46■□□□□ 0.23
IFT52Q9Y366 IGHGP-201ENST00000390555 1178 ntBASIC16.46■□□□□ 0.23
IFT52Q9Y366 AC005521.1-201ENST00000393351 872 ntBASIC16.46■□□□□ 0.23
IFT52Q9Y366 RNF152P1-201ENST00000397754 604 ntBASIC16.46■□□□□ 0.23
IFT52Q9Y366 TSPY5P-201ENST00000426936 936 ntBASIC16.46■□□□□ 0.23
IFT52Q9Y366 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.46■□□□□ 0.23
IFT52Q9Y366 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.46■□□□□ 0.23
IFT52Q9Y366 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.46■□□□□ 0.23
IFT52Q9Y366 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.46■□□□□ 0.23
IFT52Q9Y366 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.46■□□□□ 0.23
IFT52Q9Y366 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.46■□□□□ 0.23
IFT52Q9Y366 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 KRT8P47-201ENST00000604727 1398 ntBASIC16.46■□□□□ 0.23
IFT52Q9Y366 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
IFT52Q9Y366 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.46■□□□□ 0.23
IFT52Q9Y366 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
IFT52Q9Y366 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.22
IFT52Q9Y366 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
IFT52Q9Y366 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
IFT52Q9Y366 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
IFT52Q9Y366 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 PCDH8P1-201ENST00000428983 2773 ntBASIC16.45■□□□□ 0.22
IFT52Q9Y366 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 AC112698.1-201ENST00000510299 916 ntBASIC16.45■□□□□ 0.22
IFT52Q9Y366 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
IFT52Q9Y366 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
IFT52Q9Y366 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
IFT52Q9Y366 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 AL353692.3-201ENST00000407031 1396 ntBASIC16.44■□□□□ 0.22
IFT52Q9Y366 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.44■□□□□ 0.22
IFT52Q9Y366 AC092597.1-201ENST00000487352 616 ntBASIC16.44■□□□□ 0.22
IFT52Q9Y366 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.44■□□□□ 0.22
IFT52Q9Y366 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.44■□□□□ 0.22
IFT52Q9Y366 GPR32P1-201ENST00000601788 811 ntBASIC16.44■□□□□ 0.22
IFT52Q9Y366 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.44■□□□□ 0.22
IFT52Q9Y366 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
IFT52Q9Y366 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
IFT52Q9Y366 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms