Protein–RNA interactions for Protein: Q9NVF7

FBXO28, F-box only protein 28, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28Q9NVF7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 AC012317.2-201ENST00000623305 2251 ntBASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.07■□□□□ 0.8
FBXO28Q9NVF7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 AL078644.1-201ENST00000609881 752 ntBASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 PI4KAP1-204ENST00000612579 1703 ntBASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.06■□□□□ 0.8
FBXO28Q9NVF7 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 AC211486.1-202ENST00000416371 468 ntBASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 ACTG1P4-201ENST00000425123 1122 ntBASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 AC211476.1-201ENST00000503899 468 ntBASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 AC005829.1-201ENST00000570002 483 ntBASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 MIR4469-201ENST00000583919 79 ntBASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 AC004877.2-201ENST00000623941 599 ntBASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 AL354751.1-201ENST00000412768 1863 ntBASIC20.05■□□□□ 0.8
FBXO28Q9NVF7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 YBX1P5-201ENST00000509441 847 ntBASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
FBXO28Q9NVF7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms