Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
BRD9Q9H8M2 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 REXO1L9P-201ENST00000604264 2108 ntBASIC18.05■□□□□ 0.48
BRD9Q9H8M2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.05■□□□□ 0.48
BRD9Q9H8M2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 CEND1P1-201ENST00000451006 455 ntBASIC18.05■□□□□ 0.48
BRD9Q9H8M2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 AC109462.3-201ENST00000573934 613 ntBASIC18.05■□□□□ 0.48
BRD9Q9H8M2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
BRD9Q9H8M2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 MRPL20P1-201ENST00000400819 433 ntBASIC18.04■□□□□ 0.48
BRD9Q9H8M2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 AC116407.2-201ENST00000613639 860 ntBASIC18.04■□□□□ 0.48
BRD9Q9H8M2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 BICD1-207ENST00000551848 1962 ntBASIC18.04■□□□□ 0.48
BRD9Q9H8M2 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 ELL2P1-201ENST00000413990 1906 ntBASIC18.04■□□□□ 0.48
BRD9Q9H8M2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.04■□□□□ 0.48
BRD9Q9H8M2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 CYMP-203ENST00000474680 1263 ntBASIC18.03■□□□□ 0.48
BRD9Q9H8M2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 STK19B-204ENST00000512515 211 ntBASIC18.03■□□□□ 0.48
BRD9Q9H8M2 RFPL4AP1-201ENST00000530883 850 ntBASIC18.03■□□□□ 0.48
BRD9Q9H8M2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 AC010654.1-201ENST00000615722 808 ntBASIC18.03■□□□□ 0.48
BRD9Q9H8M2 AL805961.1-202ENST00000641562 540 ntBASIC18.03■□□□□ 0.48
BRD9Q9H8M2 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.03■□□□□ 0.48
BRD9Q9H8M2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms