Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 AL138688.1-201ENST00000624851 1594 ntBASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CCDC68Q9H2F9 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 SIRPAP1-201ENST00000448467 1770 ntBASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 TNRC18P3-201ENST00000441896 2691 ntBASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CCDC68Q9H2F9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 AL136038.3-201ENST00000561909 1096 ntBASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 AC124067.4-201ENST00000519691 2379 ntBASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CCDC68Q9H2F9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC68Q9H2F9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC68Q9H2F9 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CCDC68Q9H2F9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC68Q9H2F9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC68Q9H2F9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC68Q9H2F9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC68Q9H2F9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC68Q9H2F9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 AC090616.6-201ENST00000582640 721 ntBASIC17.58■□□□□ 0.4
CCDC68Q9H2F9 AC011498.5-201ENST00000592027 486 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms