Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN18Q99952 AKAP8P1-201ENST00000434743 1349 ntBASIC19.91■□□□□ 0.78
PTPN18Q99952 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.91■□□□□ 0.78
PTPN18Q99952 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.91■□□□□ 0.78
PTPN18Q99952 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN18Q99952 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN18Q99952 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN18Q99952 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PTPN18Q99952 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN18Q99952 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
PTPN18Q99952 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPN18Q99952 AC073130.3-201ENST00000624389 2278 ntBASIC19.9■□□□□ 0.78
PTPN18Q99952 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN18Q99952 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN18Q99952 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.9■□□□□ 0.78
PTPN18Q99952 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPN18Q99952 AC097493.3-201ENST00000509725 367 ntBASIC19.9■□□□□ 0.78
PTPN18Q99952 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
PTPN18Q99952 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.9■□□□□ 0.78
PTPN18Q99952 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPN18Q99952 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.9■□□□□ 0.78
PTPN18Q99952 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.9■□□□□ 0.78
PTPN18Q99952 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.9■□□□□ 0.78
PTPN18Q99952 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPN18Q99952 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.9■□□□□ 0.78
PTPN18Q99952 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPN18Q99952 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPN18Q99952 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPN18Q99952 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.9■□□□□ 0.78
PTPN18Q99952 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PTPN18Q99952 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN18Q99952 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN18Q99952 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN18Q99952 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN18Q99952 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN18Q99952 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN18Q99952 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN18Q99952 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN18Q99952 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.89■□□□□ 0.77
PTPN18Q99952 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
PTPN18Q99952 CRB3P1-201ENST00000449338 276 ntBASIC19.89■□□□□ 0.77
PTPN18Q99952 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
PTPN18Q99952 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PTPN18Q99952 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN18Q99952 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.89■□□□□ 0.77
PTPN18Q99952 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN18Q99952 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
PTPN18Q99952 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN18Q99952 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTPN18Q99952 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PTPN18Q99952 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN18Q99952 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN18Q99952 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN18Q99952 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN18Q99952 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PTPN18Q99952 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PTPN18Q99952 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN18Q99952 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN18Q99952 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN18Q99952 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPN18Q99952 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN18Q99952 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PTPN18Q99952 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN18Q99952 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.88■□□□□ 0.77
PTPN18Q99952 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN18Q99952 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN18Q99952 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.88■□□□□ 0.77
PTPN18Q99952 IGHV3-42-201ENST00000520410 361 ntBASIC19.88■□□□□ 0.77
PTPN18Q99952 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN18Q99952 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.88■□□□□ 0.77
PTPN18Q99952 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN18Q99952 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPN18Q99952 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
PTPN18Q99952 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.88■□□□□ 0.77
PTPN18Q99952 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PTPN18Q99952 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PTPN18Q99952 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.88■□□□□ 0.77
PTPN18Q99952 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PTPN18Q99952 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN18Q99952 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN18Q99952 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN18Q99952 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PTPN18Q99952 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.87■□□□□ 0.77
PTPN18Q99952 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PTPN18Q99952 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
PTPN18Q99952 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PTPN18Q99952 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.87■□□□□ 0.77
PTPN18Q99952 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms