Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHAMP1Q96JM3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHAMP1Q96JM3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CHAMP1Q96JM3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CHAMP1Q96JM3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 LINC01311-201ENST00000565162 1445 ntBASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 AC005104.2-201ENST00000427818 678 ntBASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 AC097493.4-201ENST00000641197 219 ntBASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHAMP1Q96JM3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms