Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 REXO1L3P-201ENST00000622202 1288 ntBASIC14.79□□□□□ -0.04
SPG11Q96JI7 AC025048.6-201ENST00000634326 1161 ntBASIC14.79□□□□□ -0.04
SPG11Q96JI7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.79□□□□□ -0.04
SPG11Q96JI7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SPG11Q96JI7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SPG11Q96JI7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 LINC02560-201ENST00000596379 459 ntBASIC14.78□□□□□ -0.04
SPG11Q96JI7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 AC009949.1-201ENST00000623048 1830 ntBASIC14.78□□□□□ -0.04
SPG11Q96JI7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 COX5BP2-201ENST00000392354 334 ntBASIC14.78□□□□□ -0.04
SPG11Q96JI7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 UGT1A2P-201ENST00000454886 866 ntBASIC14.78□□□□□ -0.04
SPG11Q96JI7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 AC140878.1-201ENST00000565277 250 ntBASIC14.78□□□□□ -0.04
SPG11Q96JI7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SPG11Q96JI7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SPG11Q96JI7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
SPG11Q96JI7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.77□□□□□ -0.04
SPG11Q96JI7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPG11Q96JI7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPG11Q96JI7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPG11Q96JI7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.77□□□□□ -0.04
SPG11Q96JI7 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPG11Q96JI7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.77□□□□□ -0.04
SPG11Q96JI7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.77□□□□□ -0.04
SPG11Q96JI7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SPG11Q96JI7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SPG11Q96JI7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms