Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 FAM197Y1-201ENST00000421178 764 ntBASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 AC011298.2-201ENST00000617989 482 ntBASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 AL513523.2-202ENST00000427283 2040 ntBASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMP6Q96FZ7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 AL135905.2-201ENST00000584934 1404 ntBASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CHMP6Q96FZ7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 AC116407.2-201ENST00000613639 860 ntBASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 AC079328.2-201ENST00000561241 3354 ntBASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.67■□□□□ 0.42
CHMP6Q96FZ7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHMP6Q96FZ7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms