Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 Z69720.1-201ENST00000601483 472 ntBASIC18.1■□□□□ 0.49
IFT43Q96FT9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 UNC93B7-201ENST00000509439 705 ntBASIC18.09■□□□□ 0.49
IFT43Q96FT9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 AC091304.2-201ENST00000564639 760 ntBASIC18.09■□□□□ 0.49
IFT43Q96FT9 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 AC124864.1-201ENST00000623408 392 ntBASIC18.09■□□□□ 0.49
IFT43Q96FT9 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
IFT43Q96FT9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.09■□□□□ 0.49
IFT43Q96FT9 AC012317.2-201ENST00000623305 2251 ntBASIC18.09■□□□□ 0.49
IFT43Q96FT9 AC134043.2-201ENST00000624206 2238 ntBASIC18.08■□□□□ 0.49
IFT43Q96FT9 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
IFT43Q96FT9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
IFT43Q96FT9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.49
IFT43Q96FT9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
IFT43Q96FT9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
IFT43Q96FT9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
IFT43Q96FT9 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
IFT43Q96FT9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.08■□□□□ 0.49
IFT43Q96FT9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.08■□□□□ 0.49
IFT43Q96FT9 AC233702.3-201ENST00000578656 1387 ntBASIC18.08■□□□□ 0.49
IFT43Q96FT9 GNAS-203ENST00000306120 1878 ntBASIC18.08■□□□□ 0.49
IFT43Q96FT9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.08■□□□□ 0.49
IFT43Q96FT9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.08■□□□□ 0.48
IFT43Q96FT9 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
IFT43Q96FT9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 RN7SL606P-201ENST00000472779 293 ntBASIC18.08■□□□□ 0.48
IFT43Q96FT9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.08■□□□□ 0.48
IFT43Q96FT9 IFNL4P1-201ENST00000607083 540 ntBASIC18.08■□□□□ 0.48
IFT43Q96FT9 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
IFT43Q96FT9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.08■□□□□ 0.48
IFT43Q96FT9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.08■□□□□ 0.48
IFT43Q96FT9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
IFT43Q96FT9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
IFT43Q96FT9 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
IFT43Q96FT9 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.08■□□□□ 0.48
IFT43Q96FT9 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 AL845331.1-201ENST00000424978 1190 ntBASIC18.07■□□□□ 0.48
IFT43Q96FT9 AC246785.2-201ENST00000432512 513 ntBASIC18.07■□□□□ 0.48
IFT43Q96FT9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.07■□□□□ 0.48
IFT43Q96FT9 VENTXP7-201ENST00000475503 772 ntBASIC18.07■□□□□ 0.48
IFT43Q96FT9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
IFT43Q96FT9 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms