Protein–RNA interactions for Protein: Q96AE4

FUBP1, Far upstream element-binding protein 1, humanhuman

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1Q96AE4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
FUBP1Q96AE4 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 COX5BP2-201ENST00000392354 334 ntBASIC17.53■□□□□ 0.4
FUBP1Q96AE4 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.53■□□□□ 0.4
FUBP1Q96AE4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 AC079776.4-201ENST00000511039 504 ntBASIC17.53■□□□□ 0.4
FUBP1Q96AE4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 SART3-203ENST00000546611 1184 ntBASIC17.53■□□□□ 0.4
FUBP1Q96AE4 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 AC064862.7-201ENST00000604520 867 ntBASIC17.53■□□□□ 0.4
FUBP1Q96AE4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 AP000867.4-201ENST00000641616 219 ntBASIC17.53■□□□□ 0.4
FUBP1Q96AE4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.53■□□□□ 0.4
FUBP1Q96AE4 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
FUBP1Q96AE4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 SCARNA2-201ENST00000458748 420 ntBASIC17.52■□□□□ 0.4
FUBP1Q96AE4 AF186996.4-201ENST00000467186 377 ntBASIC17.52■□□□□ 0.4
FUBP1Q96AE4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 AC116407.2-201ENST00000613639 860 ntBASIC17.52■□□□□ 0.4
FUBP1Q96AE4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 AL773604.1-201ENST00000617417 272 ntBASIC17.52■□□□□ 0.4
FUBP1Q96AE4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
FUBP1Q96AE4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
FUBP1Q96AE4 AC141586.5-201ENST00000624546 2050 ntBASIC17.52■□□□□ 0.39
FUBP1Q96AE4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
FUBP1Q96AE4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FUBP1Q96AE4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
FUBP1Q96AE4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
FUBP1Q96AE4 LINC00304-203ENST00000565008 1864 ntBASIC17.52■□□□□ 0.39
FUBP1Q96AE4 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.52■□□□□ 0.39
FUBP1Q96AE4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.52■□□□□ 0.39
FUBP1Q96AE4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.52■□□□□ 0.39
FUBP1Q96AE4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 RNPS1P1-201ENST00000507437 918 ntBASIC17.51■□□□□ 0.39
FUBP1Q96AE4 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
FUBP1Q96AE4 AC020916.1-201ENST00000587762 1774 ntBASIC17.51■□□□□ 0.39
FUBP1Q96AE4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.5■□□□□ 0.39
FUBP1Q96AE4 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.5■□□□□ 0.39
FUBP1Q96AE4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms