Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 HNRNPDP1-201ENST00000439535 754 ntBASIC17.4■□□□□ 0.38
SCAMP4Q969E2 AC018712.1-201ENST00000455767 687 ntBASIC17.4■□□□□ 0.38
SCAMP4Q969E2 AF186996.4-201ENST00000467186 377 ntBASIC17.4■□□□□ 0.38
SCAMP4Q969E2 AC073648.2-201ENST00000510116 352 ntBASIC17.4■□□□□ 0.38
SCAMP4Q969E2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 MTDHP4-201ENST00000600287 670 ntBASIC17.4■□□□□ 0.38
SCAMP4Q969E2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 AC025062.2-201ENST00000605477 670 ntBASIC17.4■□□□□ 0.38
SCAMP4Q969E2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SCAMP4Q969E2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.39■□□□□ 0.38
SCAMP4Q969E2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 MYCLP1-201ENST00000372451 1075 ntBASIC17.39■□□□□ 0.37
SCAMP4Q969E2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 AL022326.1-202ENST00000641533 845 ntBASIC17.39■□□□□ 0.37
SCAMP4Q969E2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 AC009336.1-201ENST00000608941 1553 ntBASIC17.39■□□□□ 0.37
SCAMP4Q969E2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.39■□□□□ 0.37
SCAMP4Q969E2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 RPS2P1-201ENST00000434010 821 ntBASIC17.38■□□□□ 0.37
SCAMP4Q969E2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 AL773604.1-201ENST00000617417 272 ntBASIC17.38■□□□□ 0.37
SCAMP4Q969E2 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SCAMP4Q969E2 LYSMD4-203ENST00000378904 2122 ntBASIC17.38■□□□□ 0.37
SCAMP4Q969E2 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 RNA5SP419-201ENST00000515908 135 ntBASIC17.37■□□□□ 0.37
SCAMP4Q969E2 AL662844.1-201ENST00000546340 181 ntBASIC17.37■□□□□ 0.37
SCAMP4Q969E2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 AC064862.7-201ENST00000604520 867 ntBASIC17.37■□□□□ 0.37
SCAMP4Q969E2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SCAMP4Q969E2 AL139327.4-201ENST00000612362 153 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms