Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A3Q93084 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 ABCD1P5-201ENST00000445663 754 ntBASIC18.48■□□□□ 0.55
ATP2A3Q93084 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 AP005117.1-201ENST00000584346 1413 ntBASIC18.48■□□□□ 0.55
ATP2A3Q93084 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A3Q93084 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ATP2A3Q93084 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 AC139887.3-201ENST00000568585 713 ntBASIC18.47■□□□□ 0.55
ATP2A3Q93084 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 GPALPP1-207ENST00000611650 899 ntBASIC18.47■□□□□ 0.55
ATP2A3Q93084 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A3Q93084 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A3Q93084 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 AC134043.2-201ENST00000624206 2238 ntBASIC18.46■□□□□ 0.55
ATP2A3Q93084 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 AL671883.3-201ENST00000603274 991 ntBASIC18.46■□□□□ 0.55
ATP2A3Q93084 AC117500.6-201ENST00000624871 588 ntBASIC18.46■□□□□ 0.55
ATP2A3Q93084 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A3Q93084 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.46■□□□□ 0.55
ATP2A3Q93084 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
ATP2A3Q93084 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
ATP2A3Q93084 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms