Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 HNRNPA1P23-201ENST00000491091 1133 ntBASIC17.76■□□□□ 0.43
PTCD2Q8WV60 KRT18P31-201ENST00000506277 1292 ntBASIC17.76■□□□□ 0.43
PTCD2Q8WV60 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.76■□□□□ 0.43
PTCD2Q8WV60 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 AC246785.2-201ENST00000432512 513 ntBASIC17.75■□□□□ 0.43
PTCD2Q8WV60 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 AC137695.1-201ENST00000604126 489 ntBASIC17.75■□□□□ 0.43
PTCD2Q8WV60 AL691432.3-201ENST00000621860 400 ntBASIC17.75■□□□□ 0.43
PTCD2Q8WV60 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PTCD2Q8WV60 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 NUS1P2-201ENST00000417358 873 ntBASIC17.74■□□□□ 0.43
PTCD2Q8WV60 EMBP1-201ENST00000458200 901 ntBASIC17.74■□□□□ 0.43
PTCD2Q8WV60 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 AP000240.1-201ENST00000609910 452 ntBASIC17.74■□□□□ 0.43
PTCD2Q8WV60 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.74■□□□□ 0.43
PTCD2Q8WV60 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms