Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 FUOM-202ENST00000368551 628 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 RBM17P3-201ENST00000417687 1192 ntBASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 AL590627.1-203ENST00000421194 1026 ntBASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 SLC25A6P5-201ENST00000435663 894 ntBASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 MTDHP3-201ENST00000594186 672 ntBASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 AP001269.4-201ENST00000609611 512 ntBASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 AL355877.3-201ENST00000622820 899 ntBASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CLDND2Q8NHS1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 AL031284.1-201ENST00000419297 478 ntBASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 FGFR3P6-201ENST00000457012 610 ntBASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.91□□□□□ -0.02
CLDND2Q8NHS1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms