Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 OR7E14P-202ENST00000530490 1290 ntBASIC19.56■□□□□ 0.72
USP38Q8NB14 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 AC002347.1-201ENST00000569543 541 ntBASIC19.56■□□□□ 0.72
USP38Q8NB14 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
USP38Q8NB14 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
USP38Q8NB14 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.56■□□□□ 0.72
USP38Q8NB14 AC132938.6-201ENST00000623828 1655 ntBASIC19.56■□□□□ 0.72
USP38Q8NB14 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP38Q8NB14 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
USP38Q8NB14 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.55■□□□□ 0.72
USP38Q8NB14 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP38Q8NB14 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 GNAS-203ENST00000306120 1878 ntBASIC19.55■□□□□ 0.72
USP38Q8NB14 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
USP38Q8NB14 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.55■□□□□ 0.72
USP38Q8NB14 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 MIR770-201ENST00000390219 98 ntBASIC19.55■□□□□ 0.72
USP38Q8NB14 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.55■□□□□ 0.72
USP38Q8NB14 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.55■□□□□ 0.72
USP38Q8NB14 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.55■□□□□ 0.72
USP38Q8NB14 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.55■□□□□ 0.72
USP38Q8NB14 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
USP38Q8NB14 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.55■□□□□ 0.72
USP38Q8NB14 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
USP38Q8NB14 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.55■□□□□ 0.72
USP38Q8NB14 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.55■□□□□ 0.72
USP38Q8NB14 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
USP38Q8NB14 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
USP38Q8NB14 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.54■□□□□ 0.72
USP38Q8NB14 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
USP38Q8NB14 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.54■□□□□ 0.72
USP38Q8NB14 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.54■□□□□ 0.72
USP38Q8NB14 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
USP38Q8NB14 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
USP38Q8NB14 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
USP38Q8NB14 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
USP38Q8NB14 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
USP38Q8NB14 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.54■□□□□ 0.72
USP38Q8NB14 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.54■□□□□ 0.72
USP38Q8NB14 AC122714.2-201ENST00000502787 707 ntBASIC19.54■□□□□ 0.72
USP38Q8NB14 RNA5SP416-201ENST00000516838 111 ntBASIC19.54■□□□□ 0.72
USP38Q8NB14 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.54■□□□□ 0.72
USP38Q8NB14 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.54■□□□□ 0.72
USP38Q8NB14 AC025062.2-201ENST00000605477 670 ntBASIC19.54■□□□□ 0.72
USP38Q8NB14 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
USP38Q8NB14 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.54■□□□□ 0.72
USP38Q8NB14 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC19.54■□□□□ 0.72
USP38Q8NB14 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.54■□□□□ 0.72
USP38Q8NB14 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
USP38Q8NB14 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.53■□□□□ 0.72
USP38Q8NB14 AC138028.4-201ENST00000564984 1845 ntBASIC19.53■□□□□ 0.72
USP38Q8NB14 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC19.53■□□□□ 0.72
USP38Q8NB14 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.53■□□□□ 0.72
USP38Q8NB14 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
USP38Q8NB14 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.53■□□□□ 0.72
USP38Q8NB14 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.53■□□□□ 0.72
USP38Q8NB14 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
USP38Q8NB14 AL645939.2-201ENST00000427340 991 ntBASIC19.53■□□□□ 0.72
USP38Q8NB14 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.53■□□□□ 0.72
USP38Q8NB14 SLC25A6P5-201ENST00000435663 894 ntBASIC19.53■□□□□ 0.72
USP38Q8NB14 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms