Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC138761.1-201ENST00000584393 385 ntBASIC18.9■□□□□ 0.62
HERC6Q8IVU3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 AC005498.2-205ENST00000593218 784 ntBASIC18.9■□□□□ 0.62
HERC6Q8IVU3 AC019129.2-201ENST00000609837 1235 ntBASIC18.9■□□□□ 0.62
HERC6Q8IVU3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.9■□□□□ 0.62
HERC6Q8IVU3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
HERC6Q8IVU3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
HERC6Q8IVU3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.89■□□□□ 0.62
HERC6Q8IVU3 BCL2-203ENST00000589955 5011 ntBASIC18.89■□□□□ 0.61
HERC6Q8IVU3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 AC109322.1-201ENST00000524499 1264 ntBASIC18.89■□□□□ 0.61
HERC6Q8IVU3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 MIR4745-201ENST00000577608 62 ntBASIC18.89■□□□□ 0.61
HERC6Q8IVU3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.89■□□□□ 0.61
HERC6Q8IVU3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 CROCCP3-202ENST00000420820 1947 ntBASIC18.88■□□□□ 0.61
HERC6Q8IVU3 AC097637.2-201ENST00000624096 1997 ntBASIC18.88■□□□□ 0.61
HERC6Q8IVU3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.88■□□□□ 0.61
HERC6Q8IVU3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 AC022145.2-201ENST00000598203 171 ntBASIC18.88■□□□□ 0.61
HERC6Q8IVU3 AL353135.1-201ENST00000606729 504 ntBASIC18.88■□□□□ 0.61
HERC6Q8IVU3 REXO1L3P-201ENST00000622202 1288 ntBASIC18.88■□□□□ 0.61
HERC6Q8IVU3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HERC6Q8IVU3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 AC109462.3-201ENST00000573934 613 ntBASIC18.87■□□□□ 0.61
HERC6Q8IVU3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 AL121761.2-201ENST00000598007 1648 ntBASIC18.87■□□□□ 0.61
HERC6Q8IVU3 AC068137.2-201ENST00000605408 478 ntBASIC18.87■□□□□ 0.61
HERC6Q8IVU3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 PHGDH-209ENST00000641074 1780 ntBASIC18.87■□□□□ 0.61
HERC6Q8IVU3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HERC6Q8IVU3 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HERC6Q8IVU3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms