Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.54■□□□□ 0.08
LINC00346Q8IVM7 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LINC00346Q8IVM7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 AC096633.1-201ENST00000422446 749 ntBASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 AC124864.1-201ENST00000623408 392 ntBASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.52■□□□□ 0.08
LINC00346Q8IVM7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.52■□□□□ 0.07
LINC00346Q8IVM7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.52■□□□□ 0.07
LINC00346Q8IVM7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC00346Q8IVM7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
LINC00346Q8IVM7 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.52■□□□□ 0.07
LINC00346Q8IVM7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
LINC00346Q8IVM7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
LINC00346Q8IVM7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC00346Q8IVM7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LINC00346Q8IVM7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LINC00346Q8IVM7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms