Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.56■□□□□ 0.88
RAB11FIP4Q86YS3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 AC108860.2-201ENST00000562760 2183 ntBASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 KRT18P31-201ENST00000506277 1292 ntBASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 AL591684.3-201ENST00000605187 298 ntBASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.55■□□□□ 0.88
RAB11FIP4Q86YS3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 AC005104.2-201ENST00000427818 678 ntBASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 AC132008.2-207ENST00000454517 770 ntBASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 LINC01451-201ENST00000623792 534 ntBASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RAB11FIP4Q86YS3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 TSPY19P-201ENST00000418461 509 ntBASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 POM121L3P-201ENST00000419331 1163 ntBASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 TSPY18P-201ENST00000441642 509 ntBASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 NUS1P1-201ENST00000446295 882 ntBASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 AC122714.2-201ENST00000502787 707 ntBASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 AP001269.4-201ENST00000609611 512 ntBASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RAB11FIP4Q86YS3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RAB11FIP4Q86YS3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms