Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 KRT18P32-201ENST00000424695 1287 ntBASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 CNN2P2-201ENST00000443536 909 ntBASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 CNN2P3-201ENST00000450201 906 ntBASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 AL136317.3-201ENST00000618497 906 ntBASIC10.71□□□□□ -0.69
VPS13BQ7Z7G8 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 AL627223.1-201ENST00000416693 442 ntBASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 AL596325.1-201ENST00000563991 1082 ntBASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 AC010336.2-201ENST00000564226 506 ntBASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 COQ9-214ENST00000567933 882 ntTSL 3 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
VPS13BQ7Z7G8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SPDYE11-202ENST00000450699 704 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 CR383656.12-201ENST00000549567 513 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SPDYE9P-201ENST00000570642 692 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SPDYE10P-202ENST00000612005 668 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SPDYE8P-202ENST00000612377 668 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 GRAP-202ENST00000395635 834 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SPDYE22P-201ENST00000582158 798 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC009113.1-201ENST00000570267 2443 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 LINC00982-205ENST00000420957 435 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 TIMM8BP1-201ENST00000452384 211 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC025678.2-201ENST00000562061 970 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 MIR6799-201ENST00000620297 69 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC012317.2-201ENST00000623305 2251 ntBASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC10.7□□□□□ -0.7
VPS13BQ7Z7G8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 LINC02560-201ENST00000596379 459 ntBASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC10.69□□□□□ -0.7
VPS13BQ7Z7G8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms