Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 AL024508.2-201ENST00000607749 1894 ntBASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 MIR662-201ENST00000384847 95 ntBASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 AL671277.2-201ENST00000458060 996 ntBASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 AC092597.1-201ENST00000487352 616 ntBASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 AC024563.2-201ENST00000603282 481 ntBASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 LINC01311-201ENST00000565162 1445 ntBASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ATPAF1Q5TC12 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 AC113404.2-201ENST00000507884 177 ntBASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATPAF1Q5TC12 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 AL031133.1-201ENST00000406807 723 ntBASIC15.23■□□□□ 0.03
ATPAF1Q5TC12 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms