Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
HMGXB3Q12766 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
HMGXB3Q12766 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
HMGXB3Q12766 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC30.42■■■□□ 2.46
HMGXB3Q12766 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
HMGXB3Q12766 AC142381.1-201ENST00000426099 345 ntBASIC30.42■■■□□ 2.46
HMGXB3Q12766 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC30.42■■■□□ 2.46
HMGXB3Q12766 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC30.42■■■□□ 2.46
HMGXB3Q12766 AC140912.1-201ENST00000577171 1054 ntBASIC30.42■■■□□ 2.46
HMGXB3Q12766 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
HMGXB3Q12766 AC007967.4-201ENST00000614700 386 ntBASIC30.42■■■□□ 2.46
HMGXB3Q12766 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
HMGXB3Q12766 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 POR-209ENST00000439269 1858 ntTSL 2 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
HMGXB3Q12766 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
HMGXB3Q12766 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
HMGXB3Q12766 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 AL132655.2-201ENST00000596276 594 ntBASIC30.41■■■□□ 2.46
HMGXB3Q12766 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
HMGXB3Q12766 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
HMGXB3Q12766 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
HMGXB3Q12766 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
HMGXB3Q12766 AFG3L1P-217ENST00000557444 2447 ntBASIC30.4■■■□□ 2.46
HMGXB3Q12766 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
HMGXB3Q12766 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
HMGXB3Q12766 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC30.4■■■□□ 2.46
HMGXB3Q12766 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC30.4■■■□□ 2.46
HMGXB3Q12766 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
HMGXB3Q12766 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC30.4■■■□□ 2.46
HMGXB3Q12766 RNU1-129P-201ENST00000384064 167 ntBASIC30.4■■■□□ 2.46
HMGXB3Q12766 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
HMGXB3Q12766 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC30.4■■■□□ 2.46
HMGXB3Q12766 U1.21-201ENST00000580816 167 ntBASIC30.4■■■□□ 2.46
HMGXB3Q12766 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC30.4■■■□□ 2.46
HMGXB3Q12766 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
HMGXB3Q12766 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
HMGXB3Q12766 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
HMGXB3Q12766 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC30.4■■■□□ 2.46
HMGXB3Q12766 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
HMGXB3Q12766 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
HMGXB3Q12766 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HMGXB3Q12766 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
HMGXB3Q12766 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC30.39■■■□□ 2.46
HMGXB3Q12766 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
HMGXB3Q12766 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
HMGXB3Q12766 MIR4453-201ENST00000584019 89 ntBASIC30.39■■■□□ 2.46
HMGXB3Q12766 AL031055.1-201ENST00000606362 631 ntBASIC30.39■■■□□ 2.46
HMGXB3Q12766 AL138828.2-201ENST00000615812 383 ntBASIC30.39■■■□□ 2.46
HMGXB3Q12766 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC30.39■■■□□ 2.46
HMGXB3Q12766 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HMGXB3Q12766 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
HMGXB3Q12766 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HMGXB3Q12766 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HMGXB3Q12766 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC30.39■■■□□ 2.45
HMGXB3Q12766 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
HMGXB3Q12766 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.45
HMGXB3Q12766 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.39■■■□□ 2.45
HMGXB3Q12766 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
HMGXB3Q12766 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC30.38■■■□□ 2.45
HMGXB3Q12766 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC30.38■■■□□ 2.45
HMGXB3Q12766 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC30.38■■■□□ 2.45
HMGXB3Q12766 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
HMGXB3Q12766 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
HMGXB3Q12766 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC30.38■■■□□ 2.45
HMGXB3Q12766 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC30.38■■■□□ 2.45
HMGXB3Q12766 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
HMGXB3Q12766 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
HMGXB3Q12766 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC30.38■■■□□ 2.45
HMGXB3Q12766 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC30.38■■■□□ 2.45
HMGXB3Q12766 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
HMGXB3Q12766 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
HMGXB3Q12766 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HMGXB3Q12766 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
HMGXB3Q12766 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC30.37■■■□□ 2.45
HMGXB3Q12766 AC027307.2-201ENST00000591252 911 ntBASIC30.37■■■□□ 2.45
HMGXB3Q12766 AC004233.3-201ENST00000607794 1269 ntBASIC30.37■■■□□ 2.45
HMGXB3Q12766 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
HMGXB3Q12766 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC30.37■■■□□ 2.45
HMGXB3Q12766 AL020996.1-203ENST00000536896 2307 ntBASIC30.37■■■□□ 2.45
HMGXB3Q12766 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HMGXB3Q12766 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
HMGXB3Q12766 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
HMGXB3Q12766 TP53TG3HP-202ENST00000569755 579 ntBASIC30.37■■■□□ 2.45
HMGXB3Q12766 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
HMGXB3Q12766 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
HMGXB3Q12766 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC30.36■■■□□ 2.45
HMGXB3Q12766 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HMGXB3Q12766 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HMGXB3Q12766 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC30.36■■■□□ 2.45
HMGXB3Q12766 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
HMGXB3Q12766 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms