Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRA2BP62995 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRA2BP62995 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.53■□□□□ 0.24
TRA2BP62995 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.53■□□□□ 0.24
TRA2BP62995 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRA2BP62995 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TRA2BP62995 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.52■□□□□ 0.24
TRA2BP62995 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.52■□□□□ 0.24
TRA2BP62995 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.52■□□□□ 0.24
TRA2BP62995 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.52■□□□□ 0.24
TRA2BP62995 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.52■□□□□ 0.24
TRA2BP62995 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.52■□□□□ 0.24
TRA2BP62995 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.52■□□□□ 0.24
TRA2BP62995 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.52■□□□□ 0.24
TRA2BP62995 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
TRA2BP62995 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
TRA2BP62995 AC092119.3-201ENST00000612618 583 ntBASIC16.52■□□□□ 0.24
TRA2BP62995 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.52■□□□□ 0.24
TRA2BP62995 AC073592.5-201ENST00000624854 528 ntBASIC16.52■□□□□ 0.24
TRA2BP62995 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRA2BP62995 AP001094.4-201ENST00000579008 2176 ntBASIC16.52■□□□□ 0.24
TRA2BP62995 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRA2BP62995 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRA2BP62995 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TRA2BP62995 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRA2BP62995 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRA2BP62995 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.52■□□□□ 0.23
TRA2BP62995 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRA2BP62995 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
TRA2BP62995 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.51■□□□□ 0.23
TRA2BP62995 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.51■□□□□ 0.23
TRA2BP62995 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TRA2BP62995 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TRA2BP62995 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRA2BP62995 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 KLF4P1-201ENST00000412782 1185 ntBASIC16.51■□□□□ 0.23
TRA2BP62995 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.51■□□□□ 0.23
TRA2BP62995 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.51■□□□□ 0.23
TRA2BP62995 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.51■□□□□ 0.23
TRA2BP62995 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.51■□□□□ 0.23
TRA2BP62995 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TRA2BP62995 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRA2BP62995 AC132938.5-201ENST00000624980 1813 ntBASIC16.51■□□□□ 0.23
TRA2BP62995 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.51■□□□□ 0.23
TRA2BP62995 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 PMPCAP1-201ENST00000508114 1576 ntBASIC16.51■□□□□ 0.23
TRA2BP62995 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
TRA2BP62995 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TRA2BP62995 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TRA2BP62995 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRA2BP62995 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TRA2BP62995 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.5■□□□□ 0.23
TRA2BP62995 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.5■□□□□ 0.23
TRA2BP62995 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRA2BP62995 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRA2BP62995 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TRA2BP62995 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRA2BP62995 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.5■□□□□ 0.23
TRA2BP62995 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TRA2BP62995 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms