Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MCCD1P59942 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.7■□□□□ 0.58
MCCD1P59942 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MCCD1P59942 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MCCD1P59942 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MCCD1P59942 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
MCCD1P59942 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCD1P59942 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.69■□□□□ 0.58
MCCD1P59942 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.69■□□□□ 0.58
MCCD1P59942 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCD1P59942 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCD1P59942 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
MCCD1P59942 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCD1P59942 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.69■□□□□ 0.58
MCCD1P59942 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
MCCD1P59942 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.69■□□□□ 0.58
MCCD1P59942 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MCCD1P59942 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 GPR89P-201ENST00000407924 1495 ntBASIC18.69■□□□□ 0.58
MCCD1P59942 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCD1P59942 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.69■□□□□ 0.58
MCCD1P59942 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MCCD1P59942 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCD1P59942 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.69■□□□□ 0.58
MCCD1P59942 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.68■□□□□ 0.58
MCCD1P59942 AC092053.1-201ENST00000605787 1936 ntBASIC18.68■□□□□ 0.58
MCCD1P59942 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.68■□□□□ 0.58
MCCD1P59942 AC097637.2-201ENST00000624096 1997 ntBASIC18.68■□□□□ 0.58
MCCD1P59942 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MCCD1P59942 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
MCCD1P59942 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.68■□□□□ 0.58
MCCD1P59942 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.68■□□□□ 0.58
MCCD1P59942 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.68■□□□□ 0.58
MCCD1P59942 AC064862.7-201ENST00000604520 867 ntBASIC18.68■□□□□ 0.58
MCCD1P59942 AC025062.2-201ENST00000605477 670 ntBASIC18.68■□□□□ 0.58
MCCD1P59942 AC008608.2-201ENST00000606089 416 ntBASIC18.68■□□□□ 0.58
MCCD1P59942 IFNL4P1-201ENST00000607083 540 ntBASIC18.68■□□□□ 0.58
MCCD1P59942 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.68■□□□□ 0.58
MCCD1P59942 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.68■□□□□ 0.58
MCCD1P59942 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
MCCD1P59942 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
MCCD1P59942 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.68■□□□□ 0.58
MCCD1P59942 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
MCCD1P59942 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MCCD1P59942 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.68■□□□□ 0.58
MCCD1P59942 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MCCD1P59942 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.67■□□□□ 0.58
MCCD1P59942 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
MCCD1P59942 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
MCCD1P59942 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.67■□□□□ 0.58
MCCD1P59942 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
MCCD1P59942 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.67■□□□□ 0.58
MCCD1P59942 BX005266.1-201ENST00000473402 457 ntBASIC18.67■□□□□ 0.58
MCCD1P59942 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.67■□□□□ 0.58
MCCD1P59942 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
MCCD1P59942 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.67■□□□□ 0.58
MCCD1P59942 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.67■□□□□ 0.58
MCCD1P59942 AC004706.3-202ENST00000621574 984 ntBASIC18.67■□□□□ 0.58
MCCD1P59942 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.67■□□□□ 0.58
MCCD1P59942 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MCCD1P59942 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms