Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN20P56880 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN20P56880 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN20P56880 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN20P56880 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CLDN20P56880 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 KRT8P47-201ENST00000604727 1398 ntBASIC16.1■□□□□ 0.17
CLDN20P56880 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.1■□□□□ 0.17
CLDN20P56880 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.1■□□□□ 0.17
CLDN20P56880 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLDN20P56880 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDN20P56880 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN20P56880 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN20P56880 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.09■□□□□ 0.17
CLDN20P56880 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CLDN20P56880 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CLDN20P56880 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN20P56880 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDN20P56880 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLDN20P56880 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CLDN20P56880 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN20P56880 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.09■□□□□ 0.17
CLDN20P56880 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 BNIP3P18-201ENST00000593976 575 ntBASIC16.09■□□□□ 0.17
CLDN20P56880 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.09■□□□□ 0.17
CLDN20P56880 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
CLDN20P56880 AC022898.2-201ENST00000616822 1312 ntBASIC16.09■□□□□ 0.17
CLDN20P56880 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDN20P56880 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLDN20P56880 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN20P56880 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 AC100803.2-201ENST00000562459 1963 ntBASIC16.09■□□□□ 0.17
CLDN20P56880 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CLDN20P56880 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.09■□□□□ 0.17
CLDN20P56880 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.08■□□□□ 0.17
CLDN20P56880 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN20P56880 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
CLDN20P56880 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
CLDN20P56880 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN20P56880 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN20P56880 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.08■□□□□ 0.17
CLDN20P56880 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN20P56880 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CLDN20P56880 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN20P56880 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 AL450487.1-201ENST00000426799 995 ntBASIC16.08■□□□□ 0.16
CLDN20P56880 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN20P56880 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.08■□□□□ 0.16
CLDN20P56880 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN20P56880 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 AL138831.2-201ENST00000606564 490 ntBASIC16.08■□□□□ 0.16
CLDN20P56880 AL732292.2-201ENST00000609649 430 ntBASIC16.08■□□□□ 0.16
CLDN20P56880 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CLDN20P56880 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 AC125634.1-201ENST00000438758 1403 ntBASIC16.08■□□□□ 0.16
CLDN20P56880 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.08■□□□□ 0.16
CLDN20P56880 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN20P56880 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CLDN20P56880 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CLDN20P56880 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.08■□□□□ 0.16
CLDN20P56880 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
CLDN20P56880 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CLDN20P56880 PP12613-201ENST00000424958 2230 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms