Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.3■□□□□ 0.68
PEX3P56589 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.3■□□□□ 0.68
PEX3P56589 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PEX3P56589 LYSMD4-203ENST00000378904 2122 ntBASIC19.3■□□□□ 0.68
PEX3P56589 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX3P56589 AC005332.8-201ENST00000622750 2735 ntBASIC19.3■□□□□ 0.68
PEX3P56589 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX3P56589 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.3■□□□□ 0.68
PEX3P56589 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.3■□□□□ 0.68
PEX3P56589 AL020989.1-201ENST00000422979 469 ntBASIC19.3■□□□□ 0.68
PEX3P56589 FAM197Y8-203ENST00000450145 560 ntBASIC19.3■□□□□ 0.68
PEX3P56589 SCARNA2-201ENST00000458748 420 ntBASIC19.3■□□□□ 0.68
PEX3P56589 AP002469.2-201ENST00000531724 424 ntBASIC19.3■□□□□ 0.68
PEX3P56589 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.3■□□□□ 0.68
PEX3P56589 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PEX3P56589 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX3P56589 SIGLEC16-201ENST00000599858 1437 ntBASIC19.3■□□□□ 0.68
PEX3P56589 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX3P56589 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX3P56589 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX3P56589 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PEX3P56589 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.3■□□□□ 0.68
PEX3P56589 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 AC009336.1-201ENST00000608941 1553 ntBASIC19.29■□□□□ 0.68
PEX3P56589 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 AC073592.4-201ENST00000623827 446 ntBASIC19.29■□□□□ 0.68
PEX3P56589 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.29■□□□□ 0.68
PEX3P56589 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PEX3P56589 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PEX3P56589 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.28■□□□□ 0.68
PEX3P56589 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.28■□□□□ 0.68
PEX3P56589 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.28■□□□□ 0.68
PEX3P56589 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.28■□□□□ 0.68
PEX3P56589 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.28■□□□□ 0.68
PEX3P56589 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.28■□□□□ 0.68
PEX3P56589 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.28■□□□□ 0.68
PEX3P56589 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PEX3P56589 AC009078.2-202ENST00000463353 338 ntBASIC19.28■□□□□ 0.68
PEX3P56589 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PEX3P56589 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.28■□□□□ 0.68
PEX3P56589 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.28■□□□□ 0.68
PEX3P56589 AC021087.4-201ENST00000563761 564 ntBASIC19.28■□□□□ 0.68
PEX3P56589 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.28■□□□□ 0.68
PEX3P56589 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 LINC00896-202ENST00000609602 2128 ntBASIC19.28■□□□□ 0.68
PEX3P56589 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PEX3P56589 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PEX3P56589 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.27■□□□□ 0.68
PEX3P56589 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PEX3P56589 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
PEX3P56589 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PEX3P56589 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.27■□□□□ 0.68
PEX3P56589 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PEX3P56589 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PEX3P56589 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PEX3P56589 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PEX3P56589 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.27■□□□□ 0.68
PEX3P56589 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms