Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 REXO1L3P-201ENST00000622202 1288 ntBASIC19.29■□□□□ 0.68
CDK7P50613 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.29■□□□□ 0.68
CDK7P50613 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDK7P50613 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK7P50613 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CDK7P50613 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK7P50613 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.28■□□□□ 0.68
CDK7P50613 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.28■□□□□ 0.68
CDK7P50613 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CDK7P50613 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK7P50613 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDK7P50613 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK7P50613 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK7P50613 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK7P50613 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK7P50613 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK7P50613 CXCL1P1-201ENST00000502804 216 ntBASIC19.28■□□□□ 0.68
CDK7P50613 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.28■□□□□ 0.68
CDK7P50613 AC109322.1-201ENST00000524499 1264 ntBASIC19.28■□□□□ 0.68
CDK7P50613 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.28■□□□□ 0.68
CDK7P50613 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.28■□□□□ 0.68
CDK7P50613 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK7P50613 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.28■□□□□ 0.68
CDK7P50613 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK7P50613 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK7P50613 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDK7P50613 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDK7P50613 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDK7P50613 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDK7P50613 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.27■□□□□ 0.68
CDK7P50613 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK7P50613 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK7P50613 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK7P50613 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDK7P50613 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CDK7P50613 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.27■□□□□ 0.68
CDK7P50613 PAWRP1-201ENST00000451083 565 ntBASIC19.27■□□□□ 0.68
CDK7P50613 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.27■□□□□ 0.68
CDK7P50613 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.27■□□□□ 0.68
CDK7P50613 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK7P50613 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK7P50613 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.27■□□□□ 0.68
CDK7P50613 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.27■□□□□ 0.68
CDK7P50613 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDK7P50613 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.27■□□□□ 0.68
CDK7P50613 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK7P50613 AC022145.2-201ENST00000598203 171 ntBASIC19.27■□□□□ 0.68
CDK7P50613 AC239800.4-201ENST00000603712 296 ntBASIC19.27■□□□□ 0.68
CDK7P50613 MED16-214ENST00000617672 554 ntTSL 5 BASIC19.27■□□□□ 0.68
CDK7P50613 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.27■□□□□ 0.68
CDK7P50613 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDK7P50613 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK7P50613 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.27■□□□□ 0.68
CDK7P50613 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDK7P50613 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.27■□□□□ 0.67
CDK7P50613 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDK7P50613 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CDK7P50613 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDK7P50613 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDK7P50613 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CDK7P50613 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.27■□□□□ 0.67
CDK7P50613 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDK7P50613 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CDK7P50613 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.27■□□□□ 0.67
CDK7P50613 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.26■□□□□ 0.67
CDK7P50613 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CDK7P50613 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDK7P50613 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.26■□□□□ 0.67
CDK7P50613 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDK7P50613 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.26■□□□□ 0.67
CDK7P50613 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CDK7P50613 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 AC025678.2-201ENST00000562061 970 ntBASIC19.26■□□□□ 0.67
CDK7P50613 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.26■□□□□ 0.67
CDK7P50613 AC068137.2-201ENST00000605408 478 ntBASIC19.26■□□□□ 0.67
CDK7P50613 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDK7P50613 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms