Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.78■□□□□ 0.76
TM4SF4P48230 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TM4SF4P48230 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF4P48230 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.78■□□□□ 0.76
TM4SF4P48230 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF4P48230 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TM4SF4P48230 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF4P48230 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.78■□□□□ 0.76
TM4SF4P48230 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TM4SF4P48230 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF4P48230 AC109635.5-201ENST00000533593 962 ntBASIC19.78■□□□□ 0.76
TM4SF4P48230 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF4P48230 AC073592.8-201ENST00000624126 511 ntBASIC19.78■□□□□ 0.76
TM4SF4P48230 AC008267.7-201ENST00000624570 1194 ntBASIC19.78■□□□□ 0.76
TM4SF4P48230 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.78■□□□□ 0.76
TM4SF4P48230 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.78■□□□□ 0.76
TM4SF4P48230 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF4P48230 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TM4SF4P48230 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.78■□□□□ 0.76
TM4SF4P48230 AFG3L1P-217ENST00000557444 2447 ntBASIC19.77■□□□□ 0.76
TM4SF4P48230 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF4P48230 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF4P48230 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.77■□□□□ 0.76
TM4SF4P48230 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF4P48230 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.77■□□□□ 0.76
TM4SF4P48230 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.77■□□□□ 0.76
TM4SF4P48230 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.77■□□□□ 0.76
TM4SF4P48230 AP000842.3-202ENST00000569238 1080 ntBASIC19.77■□□□□ 0.76
TM4SF4P48230 TP53TG3HP-202ENST00000569755 579 ntBASIC19.77■□□□□ 0.76
TM4SF4P48230 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
TM4SF4P48230 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.77■□□□□ 0.76
TM4SF4P48230 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TM4SF4P48230 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF4P48230 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.77■□□□□ 0.76
TM4SF4P48230 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF4P48230 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF4P48230 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TM4SF4P48230 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.77■□□□□ 0.76
TM4SF4P48230 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
TM4SF4P48230 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TM4SF4P48230 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.77■□□□□ 0.75
TM4SF4P48230 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TM4SF4P48230 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.76■□□□□ 0.75
TM4SF4P48230 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.76■□□□□ 0.75
TM4SF4P48230 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.76■□□□□ 0.75
TM4SF4P48230 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.76■□□□□ 0.75
TM4SF4P48230 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TM4SF4P48230 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC19.76■□□□□ 0.75
TM4SF4P48230 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.76■□□□□ 0.75
TM4SF4P48230 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.76■□□□□ 0.75
TM4SF4P48230 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.76■□□□□ 0.75
TM4SF4P48230 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.76■□□□□ 0.75
TM4SF4P48230 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TM4SF4P48230 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TM4SF4P48230 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.76■□□□□ 0.75
TM4SF4P48230 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.76■□□□□ 0.75
TM4SF4P48230 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.76■□□□□ 0.75
TM4SF4P48230 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.75■□□□□ 0.75
TM4SF4P48230 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.75■□□□□ 0.75
TM4SF4P48230 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.75■□□□□ 0.75
TM4SF4P48230 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TM4SF4P48230 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 AC073592.3-201ENST00000625118 1834 ntBASIC19.75■□□□□ 0.75
TM4SF4P48230 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.75■□□□□ 0.75
TM4SF4P48230 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.75■□□□□ 0.75
TM4SF4P48230 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.75■□□□□ 0.75
TM4SF4P48230 PTPA-220ENST00000436883 532 ntTSL 4 BASIC19.75■□□□□ 0.75
TM4SF4P48230 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.75■□□□□ 0.75
TM4SF4P48230 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.75■□□□□ 0.75
TM4SF4P48230 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TM4SF4P48230 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TM4SF4P48230 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.75■□□□□ 0.75
TM4SF4P48230 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.75■□□□□ 0.75
TM4SF4P48230 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.75■□□□□ 0.75
TM4SF4P48230 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
TM4SF4P48230 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TM4SF4P48230 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TM4SF4P48230 WASH6P-202ENST00000359512 1437 ntBASIC19.75■□□□□ 0.75
TM4SF4P48230 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TM4SF4P48230 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TM4SF4P48230 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms