Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC6A4P31645 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
SLC6A4P31645 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC6A4P31645 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC6A4P31645 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC6A4P31645 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SLC6A4P31645 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 AC133963.1-201ENST00000504166 1679 ntBASIC17.96■□□□□ 0.47
SLC6A4P31645 LYSMD4-203ENST00000378904 2122 ntBASIC17.96■□□□□ 0.47
SLC6A4P31645 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 AC046185.3-201ENST00000623228 1824 ntBASIC17.96■□□□□ 0.47
SLC6A4P31645 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC6A4P31645 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 AC073621.1-201ENST00000392730 636 ntBASIC17.96■□□□□ 0.47
SLC6A4P31645 AC098831.1-202ENST00000438821 336 ntBASIC17.96■□□□□ 0.47
SLC6A4P31645 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC6A4P31645 IGHV3-22-201ENST00000520721 359 ntBASIC17.96■□□□□ 0.47
SLC6A4P31645 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC6A4P31645 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SLC6A4P31645 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 AC097637.2-201ENST00000624096 1997 ntBASIC17.96■□□□□ 0.47
SLC6A4P31645 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC6A4P31645 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.96■□□□□ 0.47
SLC6A4P31645 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC6A4P31645 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC6A4P31645 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
SLC6A4P31645 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC6A4P31645 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC6A4P31645 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC6A4P31645 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC6A4P31645 AC004706.3-202ENST00000621574 984 ntBASIC17.95■□□□□ 0.46
SLC6A4P31645 AF228730.7-201ENST00000641842 219 ntBASIC17.95■□□□□ 0.46
SLC6A4P31645 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 NCF1C-201ENST00000438382 1427 ntBASIC17.95■□□□□ 0.46
SLC6A4P31645 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC6A4P31645 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC6A4P31645 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A4P31645 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A4P31645 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A4P31645 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SLC6A4P31645 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.94■□□□□ 0.46
SLC6A4P31645 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.94■□□□□ 0.46
SLC6A4P31645 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.94■□□□□ 0.46
SLC6A4P31645 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC6A4P31645 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.94■□□□□ 0.46
SLC6A4P31645 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
SLC6A4P31645 AC117500.6-201ENST00000624871 588 ntBASIC17.94■□□□□ 0.46
SLC6A4P31645 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SLC6A4P31645 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SLC6A4P31645 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SLC6A4P31645 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC6A4P31645 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SLC6A4P31645 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
SLC6A4P31645 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC6A4P31645 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms