Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.28■□□□□ 0.36
VARSP26640 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
VARSP26640 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VARSP26640 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VARSP26640 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
VARSP26640 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
VARSP26640 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
VARSP26640 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VARSP26640 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VARSP26640 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VARSP26640 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.27■□□□□ 0.36
VARSP26640 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.27■□□□□ 0.36
VARSP26640 BX276092.5-203ENST00000456199 560 ntBASIC17.27■□□□□ 0.36
VARSP26640 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.27■□□□□ 0.36
VARSP26640 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.27■□□□□ 0.36
VARSP26640 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.27■□□□□ 0.36
VARSP26640 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.27■□□□□ 0.36
VARSP26640 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.27■□□□□ 0.36
VARSP26640 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.27■□□□□ 0.36
VARSP26640 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
VARSP26640 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VARSP26640 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
VARSP26640 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
VARSP26640 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.27■□□□□ 0.35
VARSP26640 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.27■□□□□ 0.35
VARSP26640 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VARSP26640 KRT8P47-201ENST00000604727 1398 ntBASIC17.27■□□□□ 0.35
VARSP26640 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
VARSP26640 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VARSP26640 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VARSP26640 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.26■□□□□ 0.35
VARSP26640 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.26■□□□□ 0.35
VARSP26640 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
VARSP26640 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
VARSP26640 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.26■□□□□ 0.35
VARSP26640 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.26■□□□□ 0.35
VARSP26640 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.26■□□□□ 0.35
VARSP26640 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.26■□□□□ 0.35
VARSP26640 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 NPAP1P7-201ENST00000613027 823 ntBASIC17.26■□□□□ 0.35
VARSP26640 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
VARSP26640 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VARSP26640 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.26■□□□□ 0.35
VARSP26640 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
VARSP26640 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VARSP26640 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.26■□□□□ 0.35
VARSP26640 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VARSP26640 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VARSP26640 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.25■□□□□ 0.35
VARSP26640 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VARSP26640 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.25■□□□□ 0.35
VARSP26640 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 TSPY22P-201ENST00000427496 604 ntBASIC17.25■□□□□ 0.35
VARSP26640 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.25■□□□□ 0.35
VARSP26640 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 AC112698.1-201ENST00000510299 916 ntBASIC17.25■□□□□ 0.35
VARSP26640 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.25■□□□□ 0.35
VARSP26640 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.25■□□□□ 0.35
VARSP26640 AC011498.5-201ENST00000592027 486 ntBASIC17.25■□□□□ 0.35
VARSP26640 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.25■□□□□ 0.35
VARSP26640 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.25■□□□□ 0.35
VARSP26640 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC17.25■□□□□ 0.35
VARSP26640 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VARSP26640 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms