Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC130P13994 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 AC003669.1-201ENST00000334569 611 ntBASIC18.56■□□□□ 0.56
CCDC130P13994 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC130P13994 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC130P13994 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 SCARNA2-201ENST00000458748 420 ntBASIC18.56■□□□□ 0.56
CCDC130P13994 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC130P13994 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC130P13994 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC130P13994 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC130P13994 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC130P13994 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC130P13994 AC073592.4-201ENST00000623827 446 ntBASIC18.56■□□□□ 0.56
CCDC130P13994 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC130P13994 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CCDC130P13994 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC130P13994 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC130P13994 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC130P13994 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC130P13994 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC130P13994 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC130P13994 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC130P13994 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC130P13994 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
CCDC130P13994 STK19B-204ENST00000512515 211 ntBASIC18.55■□□□□ 0.56
CCDC130P13994 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC130P13994 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC130P13994 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC130P13994 SLC25A6P4-201ENST00000586535 553 ntBASIC18.55■□□□□ 0.56
CCDC130P13994 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC130P13994 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC130P13994 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CCDC130P13994 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC130P13994 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 AL020989.1-201ENST00000422979 469 ntBASIC18.54■□□□□ 0.56
CCDC130P13994 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 RNPS1P1-201ENST00000507437 918 ntBASIC18.54■□□□□ 0.56
CCDC130P13994 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC130P13994 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC130P13994 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC130P13994 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC130P13994 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC130P13994 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 SIGLEC16-201ENST00000599858 1437 ntBASIC18.54■□□□□ 0.56
CCDC130P13994 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 AC009336.1-201ENST00000608941 1553 ntBASIC18.54■□□□□ 0.56
CCDC130P13994 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC130P13994 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC130P13994 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.53■□□□□ 0.56
CCDC130P13994 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC130P13994 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC130P13994 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC130P13994 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC130P13994 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms