Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.25■□□□□ 0.67
ITGA4P13612 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA4P13612 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ITGA4P13612 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA4P13612 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA4P13612 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA4P13612 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ITGA4P13612 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA4P13612 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ITGA4P13612 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ITGA4P13612 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.24■□□□□ 0.67
ITGA4P13612 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.24■□□□□ 0.67
ITGA4P13612 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.24■□□□□ 0.67
ITGA4P13612 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.24■□□□□ 0.67
ITGA4P13612 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.24■□□□□ 0.67
ITGA4P13612 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ITGA4P13612 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ITGA4P13612 COX5BP2-201ENST00000392354 334 ntBASIC19.24■□□□□ 0.67
ITGA4P13612 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.24■□□□□ 0.67
ITGA4P13612 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.24■□□□□ 0.67
ITGA4P13612 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.24■□□□□ 0.67
ITGA4P13612 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.24■□□□□ 0.67
ITGA4P13612 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ITGA4P13612 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ITGA4P13612 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.24■□□□□ 0.67
ITGA4P13612 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.24■□□□□ 0.67
ITGA4P13612 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ITGA4P13612 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ITGA4P13612 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.23■□□□□ 0.67
ITGA4P13612 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
ITGA4P13612 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 AC138932.1-201ENST00000534164 6830 ntBASIC19.23■□□□□ 0.67
ITGA4P13612 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ITGA4P13612 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ITGA4P13612 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 AC103564.2-201ENST00000432853 1299 ntBASIC19.23■□□□□ 0.67
ITGA4P13612 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 SLC25A1P1-201ENST00000528351 927 ntBASIC19.23■□□□□ 0.67
ITGA4P13612 OR7E14P-202ENST00000530490 1290 ntBASIC19.23■□□□□ 0.67
ITGA4P13612 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA4P13612 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA4P13612 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA4P13612 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.23■□□□□ 0.67
ITGA4P13612 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ITGA4P13612 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ITGA4P13612 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.23■□□□□ 0.67
ITGA4P13612 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ITGA4P13612 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
ITGA4P13612 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ITGA4P13612 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ITGA4P13612 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ITGA4P13612 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.22■□□□□ 0.67
ITGA4P13612 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA4P13612 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ITGA4P13612 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 FLJ13224-201ENST00000313737 1514 ntBASIC19.22■□□□□ 0.67
ITGA4P13612 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.22■□□□□ 0.67
ITGA4P13612 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ITGA4P13612 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
ITGA4P13612 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.22■□□□□ 0.67
ITGA4P13612 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ITGA4P13612 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.22■□□□□ 0.67
ITGA4P13612 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA4P13612 MTDHP4-201ENST00000600287 670 ntBASIC19.22■□□□□ 0.67
ITGA4P13612 AC025062.2-201ENST00000605477 670 ntBASIC19.22■□□□□ 0.67
ITGA4P13612 AC116407.3-201ENST00000623905 1129 ntBASIC19.22■□□□□ 0.67
ITGA4P13612 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 PMPCAP1-201ENST00000508114 1576 ntBASIC19.22■□□□□ 0.67
ITGA4P13612 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ITGA4P13612 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.22■□□□□ 0.67
ITGA4P13612 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.22■□□□□ 0.67
ITGA4P13612 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ITGA4P13612 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA4P13612 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA4P13612 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA4P13612 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
ITGA4P13612 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ITGA4P13612 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms