Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.77■□□□□ 0.44
HLA-DQB2P05538 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.77■□□□□ 0.43
HLA-DQB2P05538 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DQB2P05538 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
HLA-DQB2P05538 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DQB2P05538 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DQB2P05538 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HLA-DQB2P05538 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.77■□□□□ 0.43
HLA-DQB2P05538 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 AC106820.2-201ENST00000563775 3264 ntBASIC17.76■□□□□ 0.43
HLA-DQB2P05538 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 KLF4P1-201ENST00000412782 1185 ntBASIC17.76■□□□□ 0.43
HLA-DQB2P05538 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 STK19B-204ENST00000512515 211 ntBASIC17.76■□□□□ 0.43
HLA-DQB2P05538 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 AP001269.4-201ENST00000609611 512 ntBASIC17.76■□□□□ 0.43
HLA-DQB2P05538 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HLA-DQB2P05538 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 AC009336.1-201ENST00000608941 1553 ntBASIC17.75■□□□□ 0.43
HLA-DQB2P05538 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 AC003669.1-201ENST00000334569 611 ntBASIC17.75■□□□□ 0.43
HLA-DQB2P05538 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 ABCD1P5-201ENST00000445663 754 ntBASIC17.75■□□□□ 0.43
HLA-DQB2P05538 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 AC132008.2-207ENST00000454517 770 ntBASIC17.75■□□□□ 0.43
HLA-DQB2P05538 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 AL121772.3-201ENST00000610840 674 ntBASIC17.75■□□□□ 0.43
HLA-DQB2P05538 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HLA-DQB2P05538 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 AC148477.5-201ENST00000625164 1645 ntBASIC17.74■□□□□ 0.43
HLA-DQB2P05538 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.74■□□□□ 0.43
HLA-DQB2P05538 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms