Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.96■□□□□ 0.95
POLR3DP05423 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR3DP05423 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
POLR3DP05423 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
POLR3DP05423 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.96■□□□□ 0.95
POLR3DP05423 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.96■□□□□ 0.95
POLR3DP05423 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.96■□□□□ 0.95
POLR3DP05423 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR3DP05423 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR3DP05423 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
POLR3DP05423 AL049757.1-201ENST00000616842 1596 ntBASIC20.96■□□□□ 0.95
POLR3DP05423 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR3DP05423 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.96■□□□□ 0.95
POLR3DP05423 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
POLR3DP05423 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
POLR3DP05423 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.95
POLR3DP05423 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
POLR3DP05423 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR3DP05423 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR3DP05423 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
POLR3DP05423 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR3DP05423 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR3DP05423 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLR3DP05423 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.95■□□□□ 0.94
POLR3DP05423 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.95■□□□□ 0.94
POLR3DP05423 SLC25A1P1-201ENST00000528351 927 ntBASIC20.95■□□□□ 0.94
POLR3DP05423 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.95■□□□□ 0.94
POLR3DP05423 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.95■□□□□ 0.94
POLR3DP05423 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.95■□□□□ 0.94
POLR3DP05423 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
POLR3DP05423 AL022326.1-202ENST00000641533 845 ntBASIC20.95■□□□□ 0.94
POLR3DP05423 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
POLR3DP05423 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR3DP05423 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.95■□□□□ 0.94
POLR3DP05423 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
POLR3DP05423 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 KRT18P55-202ENST00000578578 1546 ntBASIC20.94■□□□□ 0.94
POLR3DP05423 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR3DP05423 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 HLA-J-201ENST00000462773 1622 ntBASIC20.94■□□□□ 0.94
POLR3DP05423 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR3DP05423 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
POLR3DP05423 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.94■□□□□ 0.94
POLR3DP05423 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.94■□□□□ 0.94
POLR3DP05423 AC109462.3-201ENST00000573934 613 ntBASIC20.94■□□□□ 0.94
POLR3DP05423 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.94■□□□□ 0.94
POLR3DP05423 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
POLR3DP05423 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.94■□□□□ 0.94
POLR3DP05423 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
POLR3DP05423 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
POLR3DP05423 AL353593.2-201ENST00000602529 1483 ntBASIC20.94■□□□□ 0.94
POLR3DP05423 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
POLR3DP05423 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
POLR3DP05423 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
POLR3DP05423 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
POLR3DP05423 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.93■□□□□ 0.94
POLR3DP05423 SPDYE21P-201ENST00000413323 827 ntBASIC20.93■□□□□ 0.94
POLR3DP05423 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR3DP05423 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.93■□□□□ 0.94
POLR3DP05423 AC012640.2-201ENST00000561606 901 ntBASIC20.93■□□□□ 0.94
POLR3DP05423 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
POLR3DP05423 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
POLR3DP05423 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR3DP05423 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.93■□□□□ 0.94
POLR3DP05423 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.93■□□□□ 0.94
POLR3DP05423 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
POLR3DP05423 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR3DP05423 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
POLR3DP05423 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
POLR3DP05423 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms