Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF13O43567 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF13O43567 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16■□□□□ 0.15
RNF13O43567 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16■□□□□ 0.15
RNF13O43567 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16■□□□□ 0.15
RNF13O43567 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16■□□□□ 0.15
RNF13O43567 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16■□□□□ 0.15
RNF13O43567 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16■□□□□ 0.15
RNF13O43567 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16■□□□□ 0.15
RNF13O43567 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16■□□□□ 0.15
RNF13O43567 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16■□□□□ 0.15
RNF13O43567 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16■□□□□ 0.15
RNF13O43567 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16■□□□□ 0.15
RNF13O43567 CROCCP2-202ENST00000412962 2773 ntBASIC16■□□□□ 0.15
RNF13O43567 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16■□□□□ 0.15
RNF13O43567 Z83836.1-201ENST00000624605 1642 ntBASIC16■□□□□ 0.15
RNF13O43567 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16■□□□□ 0.15
RNF13O43567 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF13O43567 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RNF13O43567 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16■□□□□ 0.15
RNF13O43567 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RNF13O43567 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF13O43567 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RNF13O43567 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16■□□□□ 0.15
RNF13O43567 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16■□□□□ 0.15
RNF13O43567 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RNF13O43567 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 AC133963.1-201ENST00000504166 1679 ntBASIC15.99■□□□□ 0.15
RNF13O43567 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 DDX43P3-201ENST00000441064 443 ntBASIC15.99■□□□□ 0.15
RNF13O43567 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 KRT18P21-201ENST00000515767 1272 ntBASIC15.99■□□□□ 0.15
RNF13O43567 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
RNF13O43567 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.99■□□□□ 0.15
RNF13O43567 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 AC083849.1-201ENST00000615227 514 ntBASIC15.99■□□□□ 0.15
RNF13O43567 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.99■□□□□ 0.15
RNF13O43567 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RNF13O43567 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RNF13O43567 AL118508.1-201ENST00000613502 2345 ntBASIC15.99■□□□□ 0.15
RNF13O43567 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.99■□□□□ 0.15
RNF13O43567 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF13O43567 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF13O43567 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF13O43567 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF13O43567 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.98■□□□□ 0.15
RNF13O43567 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF13O43567 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF13O43567 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RNF13O43567 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.98■□□□□ 0.15
RNF13O43567 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF13O43567 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF13O43567 AL390719.2-201ENST00000606993 987 ntBASIC15.98■□□□□ 0.15
RNF13O43567 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.98■□□□□ 0.15
RNF13O43567 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF13O43567 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RNF13O43567 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.98■□□□□ 0.15
RNF13O43567 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.98■□□□□ 0.15
RNF13O43567 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RNF13O43567 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RNF13O43567 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms