Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.02■□□□□ 0.32
UBFD1O14562 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
UBFD1O14562 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBFD1O14562 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBFD1O14562 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBFD1O14562 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.02■□□□□ 0.31
UBFD1O14562 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBFD1O14562 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
UBFD1O14562 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBFD1O14562 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UBFD1O14562 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 AC093525.9-201ENST00000624961 1746 ntBASIC17.01■□□□□ 0.31
UBFD1O14562 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.01■□□□□ 0.31
UBFD1O14562 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UBFD1O14562 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UBFD1O14562 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.01■□□□□ 0.31
UBFD1O14562 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
UBFD1O14562 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.01■□□□□ 0.31
UBFD1O14562 AK4P3-201ENST00000418260 669 ntBASIC17.01■□□□□ 0.31
UBFD1O14562 AC007967.3-201ENST00000434308 558 ntBASIC17.01■□□□□ 0.31
UBFD1O14562 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.01■□□□□ 0.31
UBFD1O14562 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.01■□□□□ 0.31
UBFD1O14562 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.01■□□□□ 0.31
UBFD1O14562 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.01■□□□□ 0.31
UBFD1O14562 AC083849.1-201ENST00000615227 514 ntBASIC17.01■□□□□ 0.31
UBFD1O14562 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UBFD1O14562 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.01■□□□□ 0.31
UBFD1O14562 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UBFD1O14562 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 PCDHA14-201ENST00000506751 2298 ntBASIC17.01■□□□□ 0.31
UBFD1O14562 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.01■□□□□ 0.31
UBFD1O14562 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
UBFD1O14562 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.01■□□□□ 0.31
UBFD1O14562 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.01■□□□□ 0.31
UBFD1O14562 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UBFD1O14562 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
UBFD1O14562 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UBFD1O14562 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17■□□□□ 0.31
UBFD1O14562 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17■□□□□ 0.31
UBFD1O14562 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17■□□□□ 0.31
UBFD1O14562 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17■□□□□ 0.31
UBFD1O14562 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17■□□□□ 0.31
UBFD1O14562 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UBFD1O14562 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UBFD1O14562 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17■□□□□ 0.31
UBFD1O14562 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UBFD1O14562 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UBFD1O14562 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UBFD1O14562 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17■□□□□ 0.31
UBFD1O14562 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UBFD1O14562 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
UBFD1O14562 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UBFD1O14562 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
UBFD1O14562 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.99■□□□□ 0.31
UBFD1O14562 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.99■□□□□ 0.31
UBFD1O14562 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
UBFD1O14562 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
UBFD1O14562 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.99■□□□□ 0.31
UBFD1O14562 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UBFD1O14562 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms