Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN4O14493 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.53■□□□□ 0.24
CLDN4O14493 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN4O14493 AD001527.2-201ENST00000622994 785 ntBASIC16.53■□□□□ 0.24
CLDN4O14493 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLDN4O14493 AL353593.2-201ENST00000602529 1483 ntBASIC16.53■□□□□ 0.24
CLDN4O14493 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN4O14493 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN4O14493 KRT8P10-201ENST00000450021 1447 ntBASIC16.53■□□□□ 0.24
CLDN4O14493 AP005117.1-201ENST00000584346 1413 ntBASIC16.53■□□□□ 0.24
CLDN4O14493 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLDN4O14493 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CLDN4O14493 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 AC068880.1-201ENST00000507289 2297 ntBASIC16.52■□□□□ 0.24
CLDN4O14493 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLDN4O14493 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN4O14493 SAPCD2P3-201ENST00000455031 850 ntBASIC16.52■□□□□ 0.24
CLDN4O14493 AC106795.1-205ENST00000512851 1056 ntBASIC16.52■□□□□ 0.24
CLDN4O14493 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN4O14493 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CLDN4O14493 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLDN4O14493 AC019129.2-201ENST00000609837 1235 ntBASIC16.52■□□□□ 0.24
CLDN4O14493 REXO1L6P-202ENST00000619970 1078 ntBASIC16.52■□□□□ 0.24
CLDN4O14493 AP000867.4-201ENST00000641616 219 ntBASIC16.52■□□□□ 0.24
CLDN4O14493 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN4O14493 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN4O14493 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN4O14493 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN4O14493 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN4O14493 LINC00304-203ENST00000565008 1864 ntBASIC16.52■□□□□ 0.23
CLDN4O14493 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN4O14493 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN4O14493 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CLDN4O14493 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CLDN4O14493 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN4O14493 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CLDN4O14493 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 AC003669.1-201ENST00000334569 611 ntBASIC16.51■□□□□ 0.23
CLDN4O14493 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 TPM4P1-201ENST00000436100 807 ntBASIC16.51■□□□□ 0.23
CLDN4O14493 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 FAAHP1-202ENST00000446499 1238 ntBASIC16.51■□□□□ 0.23
CLDN4O14493 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.51■□□□□ 0.23
CLDN4O14493 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN4O14493 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.51■□□□□ 0.23
CLDN4O14493 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 AC073592.5-201ENST00000624854 528 ntBASIC16.51■□□□□ 0.23
CLDN4O14493 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN4O14493 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN4O14493 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN4O14493 PMPCAP1-201ENST00000508114 1576 ntBASIC16.51■□□□□ 0.23
CLDN4O14493 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN4O14493 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN4O14493 AL133373.2-201ENST00000623187 2828 ntBASIC16.51■□□□□ 0.23
CLDN4O14493 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLDN4O14493 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.5■□□□□ 0.23
CLDN4O14493 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms