Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E2F3O00716 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.11■□□□□ 0.33
E2F3O00716 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.11■□□□□ 0.33
E2F3O00716 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.11■□□□□ 0.33
E2F3O00716 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E2F3O00716 AC002558.1-201ENST00000488906 803 ntBASIC17.11■□□□□ 0.33
E2F3O00716 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.11■□□□□ 0.33
E2F3O00716 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.11■□□□□ 0.33
E2F3O00716 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.11■□□□□ 0.33
E2F3O00716 AL139327.4-201ENST00000612362 153 ntBASIC17.11■□□□□ 0.33
E2F3O00716 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
E2F3O00716 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
E2F3O00716 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
E2F3O00716 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.11■□□□□ 0.33
E2F3O00716 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
E2F3O00716 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
E2F3O00716 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
E2F3O00716 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.11■□□□□ 0.33
E2F3O00716 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.1■□□□□ 0.33
E2F3O00716 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
E2F3O00716 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
E2F3O00716 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 TSPY22P-201ENST00000427496 604 ntBASIC17.1■□□□□ 0.33
E2F3O00716 AC007967.3-201ENST00000434308 558 ntBASIC17.1■□□□□ 0.33
E2F3O00716 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.1■□□□□ 0.33
E2F3O00716 GUSBP12-201ENST00000513727 720 ntBASIC17.1■□□□□ 0.33
E2F3O00716 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.1■□□□□ 0.33
E2F3O00716 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
E2F3O00716 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
E2F3O00716 AL353801.3-201ENST00000609898 542 ntBASIC17.1■□□□□ 0.33
E2F3O00716 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.1■□□□□ 0.33
E2F3O00716 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
E2F3O00716 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
E2F3O00716 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.1■□□□□ 0.33
E2F3O00716 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
E2F3O00716 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.09■□□□□ 0.33
E2F3O00716 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.09■□□□□ 0.33
E2F3O00716 AL845331.1-201ENST00000424978 1190 ntBASIC17.09■□□□□ 0.33
E2F3O00716 AC246785.2-201ENST00000432512 513 ntBASIC17.09■□□□□ 0.33
E2F3O00716 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.09■□□□□ 0.33
E2F3O00716 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.09■□□□□ 0.33
E2F3O00716 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.09■□□□□ 0.33
E2F3O00716 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.09■□□□□ 0.33
E2F3O00716 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.09■□□□□ 0.33
E2F3O00716 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 AL592071.1-201ENST00000611956 408 ntBASIC17.09■□□□□ 0.33
E2F3O00716 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.09■□□□□ 0.33
E2F3O00716 AL121761.2-201ENST00000598007 1648 ntBASIC17.09■□□□□ 0.33
E2F3O00716 AC116353.5-201ENST00000638148 1699 ntBASIC17.09■□□□□ 0.33
E2F3O00716 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.09■□□□□ 0.33
E2F3O00716 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
E2F3O00716 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
E2F3O00716 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
E2F3O00716 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
E2F3O00716 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.08■□□□□ 0.33
E2F3O00716 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
E2F3O00716 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
E2F3O00716 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
E2F3O00716 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
E2F3O00716 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
E2F3O00716 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.08■□□□□ 0.33
E2F3O00716 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
E2F3O00716 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.08■□□□□ 0.32
E2F3O00716 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms