Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM38O00635 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM38O00635 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM38O00635 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM38O00635 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM38O00635 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM38O00635 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 AL049840.3-201ENST00000602669 611 ntBASIC17.66■□□□□ 0.42
TRIM38O00635 AL355877.3-201ENST00000622820 899 ntBASIC17.66■□□□□ 0.42
TRIM38O00635 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM38O00635 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM38O00635 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM38O00635 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM38O00635 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 AC108860.2-201ENST00000562760 2183 ntBASIC17.66■□□□□ 0.42
TRIM38O00635 MYLKP1-201ENST00000509077 1580 ntBASIC17.66■□□□□ 0.42
TRIM38O00635 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM38O00635 AC243591.1-201ENST00000452967 1364 ntBASIC17.66■□□□□ 0.42
TRIM38O00635 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM38O00635 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM38O00635 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM38O00635 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM38O00635 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM38O00635 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM38O00635 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM38O00635 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM38O00635 AC018712.1-201ENST00000455767 687 ntBASIC17.65■□□□□ 0.42
TRIM38O00635 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM38O00635 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM38O00635 RNPS1P1-201ENST00000507437 918 ntBASIC17.65■□□□□ 0.42
TRIM38O00635 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM38O00635 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM38O00635 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM38O00635 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM38O00635 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM38O00635 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM38O00635 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
TRIM38O00635 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM38O00635 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM38O00635 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM38O00635 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM38O00635 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.64■□□□□ 0.42
TRIM38O00635 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM38O00635 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM38O00635 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM38O00635 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM38O00635 FGFR3P6-201ENST00000457012 610 ntBASIC17.64■□□□□ 0.41
TRIM38O00635 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM38O00635 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM38O00635 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM38O00635 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.64■□□□□ 0.41
TRIM38O00635 AC117500.6-201ENST00000624871 588 ntBASIC17.64■□□□□ 0.41
TRIM38O00635 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM38O00635 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM38O00635 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM38O00635 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM38O00635 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms