Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.77■□□□□ 0.6
FOXN3O00409 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.77■□□□□ 0.6
FOXN3O00409 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
FOXN3O00409 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
FOXN3O00409 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN3O00409 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.77■□□□□ 0.59
FOXN3O00409 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN3O00409 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN3O00409 TP73-AS1-210ENST00000637775 1455 ntBASIC18.77■□□□□ 0.59
FOXN3O00409 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
FOXN3O00409 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
FOXN3O00409 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
FOXN3O00409 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.76■□□□□ 0.59
FOXN3O00409 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
FOXN3O00409 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 ARMC10P1-201ENST00000313754 855 ntBASIC18.76■□□□□ 0.59
FOXN3O00409 MYCLP1-201ENST00000372451 1075 ntBASIC18.76■□□□□ 0.59
FOXN3O00409 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.76■□□□□ 0.59
FOXN3O00409 IGHV3-47-201ENST00000425060 335 ntBASIC18.76■□□□□ 0.59
FOXN3O00409 KRT17P6-201ENST00000453795 1220 ntBASIC18.76■□□□□ 0.59
FOXN3O00409 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
FOXN3O00409 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
FOXN3O00409 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.76■□□□□ 0.59
FOXN3O00409 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 AC009053.2-201ENST00000563701 2365 ntBASIC18.76■□□□□ 0.59
FOXN3O00409 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
FOXN3O00409 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
FOXN3O00409 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXN3O00409 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
FOXN3O00409 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
FOXN3O00409 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
FOXN3O00409 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
FOXN3O00409 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
FOXN3O00409 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.75■□□□□ 0.59
FOXN3O00409 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXN3O00409 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
FOXN3O00409 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXN3O00409 AC010331.1-201ENST00000611423 582 ntBASIC18.75■□□□□ 0.59
FOXN3O00409 NPAP1P7-201ENST00000613027 823 ntBASIC18.75■□□□□ 0.59
FOXN3O00409 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXN3O00409 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXN3O00409 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.75■□□□□ 0.59
FOXN3O00409 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
FOXN3O00409 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
FOXN3O00409 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.75■□□□□ 0.59
FOXN3O00409 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN3O00409 NSUN5P1-202ENST00000421140 1535 ntBASIC18.74■□□□□ 0.59
FOXN3O00409 NSUN5P2-203ENST00000457352 1529 ntBASIC18.74■□□□□ 0.59
FOXN3O00409 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXN3O00409 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXN3O00409 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
FOXN3O00409 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
FOXN3O00409 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
FOXN3O00409 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN3O00409 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 LINC00265-3P-201ENST00000447588 903 ntBASIC18.74■□□□□ 0.59
FOXN3O00409 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.74■□□□□ 0.59
FOXN3O00409 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.74■□□□□ 0.59
FOXN3O00409 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.74■□□□□ 0.59
FOXN3O00409 BNIP3P18-201ENST00000593976 575 ntBASIC18.74■□□□□ 0.59
FOXN3O00409 Z69720.1-201ENST00000601483 472 ntBASIC18.74■□□□□ 0.59
FOXN3O00409 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXN3O00409 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.74■□□□□ 0.59
FOXN3O00409 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.74■□□□□ 0.59
FOXN3O00409 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
FOXN3O00409 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
FOXN3O00409 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms