Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.21■□□□□ 0.35
CDC7O00311 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.21■□□□□ 0.35
CDC7O00311 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CDC7O00311 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDC7O00311 AL590326.2-201ENST00000625139 305 ntBASIC17.21■□□□□ 0.35
CDC7O00311 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.21■□□□□ 0.35
CDC7O00311 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDC7O00311 AC016396.2-201ENST00000562575 1417 ntBASIC17.21■□□□□ 0.34
CDC7O00311 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.21■□□□□ 0.34
CDC7O00311 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CDC7O00311 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CDC7O00311 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.21■□□□□ 0.34
CDC7O00311 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDC7O00311 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.2■□□□□ 0.34
CDC7O00311 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.2■□□□□ 0.34
CDC7O00311 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.2■□□□□ 0.34
CDC7O00311 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.2■□□□□ 0.34
CDC7O00311 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.2■□□□□ 0.34
CDC7O00311 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.2■□□□□ 0.34
CDC7O00311 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CDC7O00311 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.2■□□□□ 0.34
CDC7O00311 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.2■□□□□ 0.34
CDC7O00311 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.2■□□□□ 0.34
CDC7O00311 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CDC7O00311 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.19■□□□□ 0.34
CDC7O00311 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 AD000864.1-201ENST00000624076 2295 ntBASIC17.19■□□□□ 0.34
CDC7O00311 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.19■□□□□ 0.34
CDC7O00311 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.19■□□□□ 0.34
CDC7O00311 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.19■□□□□ 0.34
CDC7O00311 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.19■□□□□ 0.34
CDC7O00311 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.19■□□□□ 0.34
CDC7O00311 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
CDC7O00311 TSSC2-201ENST00000450217 709 ntBASIC17.19■□□□□ 0.34
CDC7O00311 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.19■□□□□ 0.34
CDC7O00311 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.19■□□□□ 0.34
CDC7O00311 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.19■□□□□ 0.34
CDC7O00311 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.19■□□□□ 0.34
CDC7O00311 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.19■□□□□ 0.34
CDC7O00311 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.19■□□□□ 0.34
CDC7O00311 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.19■□□□□ 0.34
CDC7O00311 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.19■□□□□ 0.34
CDC7O00311 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CDC7O00311 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.19■□□□□ 0.34
CDC7O00311 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
CDC7O00311 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CDC7O00311 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CDC7O00311 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CDC7O00311 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.18■□□□□ 0.34
CDC7O00311 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDC7O00311 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms