Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 AF186996.4-201ENST00000467186 377 ntBASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.26■□□□□ 0.51
YJEFN3A6XGL0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 RPS2P1-201ENST00000434010 821 ntBASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 RNA5SP419-201ENST00000515908 135 ntBASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 PCDHB18P-201ENST00000524813 2368 ntBASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.25■□□□□ 0.51
YJEFN3A6XGL0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 AL773604.1-201ENST00000617417 272 ntBASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
YJEFN3A6XGL0 HLA-A-201ENST00000376802 1334 ntBASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 PP12613-201ENST00000424958 2230 ntBASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
YJEFN3A6XGL0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms