Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RCCD1A6NED2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
RCCD1A6NED2 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.64■□□□□ 0.58
RCCD1A6NED2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RCCD1A6NED2 AC079328.2-201ENST00000561241 3354 ntBASIC18.64■□□□□ 0.58
RCCD1A6NED2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RCCD1A6NED2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RCCD1A6NED2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RCCD1A6NED2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.64■□□□□ 0.57
RCCD1A6NED2 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.64■□□□□ 0.57
RCCD1A6NED2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RCCD1A6NED2 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 LINC02199-201ENST00000506655 2702 ntBASIC18.63■□□□□ 0.57
RCCD1A6NED2 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 AC002558.1-201ENST00000488906 803 ntBASIC18.63■□□□□ 0.57
RCCD1A6NED2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 AC011558.1-201ENST00000623459 338 ntBASIC18.63■□□□□ 0.57
RCCD1A6NED2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RCCD1A6NED2 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.63■□□□□ 0.57
RCCD1A6NED2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 MIR662-201ENST00000384847 95 ntBASIC18.62■□□□□ 0.57
RCCD1A6NED2 COX5BP2-201ENST00000392354 334 ntBASIC18.62■□□□□ 0.57
RCCD1A6NED2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.62■□□□□ 0.57
RCCD1A6NED2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 AC145285.6-201ENST00000604632 637 ntBASIC18.62■□□□□ 0.57
RCCD1A6NED2 AC140113.3-201ENST00000605663 199 ntBASIC18.62■□□□□ 0.57
RCCD1A6NED2 AC019129.2-201ENST00000609837 1235 ntBASIC18.62■□□□□ 0.57
RCCD1A6NED2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.62■□□□□ 0.57
RCCD1A6NED2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RCCD1A6NED2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms