Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 RCN1P1-201ENST00000400413 996 ntBASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 AL645929.1-201ENST00000420084 975 ntBASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 AC109462.3-201ENST00000573934 613 ntBASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 AC005336.2-201ENST00000593183 939 ntBASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TCRBV7S3A2A0A539 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 LINC02012-201ENST00000608206 1725 ntBASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 AC093525.9-201ENST00000624961 1746 ntBASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 AC125634.1-201ENST00000438758 1403 ntBASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.81■□□□□ 0.44
TCRBV7S3A2A0A539 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 AL118508.1-201ENST00000613502 2345 ntBASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 TSPY22P-201ENST00000427496 604 ntBASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 DUX4L26-201ENST00000489078 1255 ntBASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 AL353801.3-201ENST00000609898 542 ntBASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 AL592071.1-201ENST00000611956 408 ntBASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 AC124864.1-201ENST00000623408 392 ntBASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 AC105020.1-201ENST00000435356 2205 ntBASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TCRBV7S3A2A0A539 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms