Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC145285.6-201ENST00000604632 637 ntBASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 AL138688.1-201ENST00000624851 1594 ntBASIC16.94■□□□□ 0.3
RNF103-CHMP3A0A140T963 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC100803.2-201ENST00000562459 1963 ntBASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC087499.1-201ENST00000418141 1075 ntBASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 LINC00167-201ENST00000530583 1419 ntBASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF103-CHMP3A0A140T963 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC034232.1-201ENST00000506026 1064 ntBASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 GCSHP2-201ENST00000560971 527 ntBASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 AL138966.2-201ENST00000621997 464 ntBASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 AC066615.1-201ENST00000640911 628 ntBASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF103-CHMP3A0A140T963 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms