Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 AC012640.2-201ENST00000561606 901 ntBASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 AL773604.1-201ENST00000617417 272 ntBASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLDN16Q9Y5I7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 AL031284.1-201ENST00000419297 478 ntBASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 AF186996.4-201ENST00000467186 377 ntBASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 AC073648.2-201ENST00000510116 352 ntBASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 AL662844.1-201ENST00000546340 181 ntBASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLDN16Q9Y5I7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CLDN16Q9Y5I7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN16Q9Y5I7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN16Q9Y5I7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.27■□□□□ 0.19
CLDN16Q9Y5I7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN16Q9Y5I7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN16Q9Y5I7 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CLDN16Q9Y5I7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN16Q9Y5I7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CLDN16Q9Y5I7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 KRT18P27-201ENST00000427733 1299 ntBASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 AL589182.2-201ENST00000619332 1049 ntBASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.26■□□□□ 0.19
CLDN16Q9Y5I7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 AC073621.1-201ENST00000392730 636 ntBASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 ACTG1P4-201ENST00000425123 1122 ntBASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 LAGE3P1-201ENST00000425356 484 ntBASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.25■□□□□ 0.19
CLDN16Q9Y5I7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms