Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC015922.1-201ENST00000421102 1152 ntBASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 AL592309.1-201ENST00000443127 649 ntBASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 SLC25A6P2-201ENST00000497974 877 ntBASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RTCBQ9Y3I0 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 CROCCP3-202ENST00000420820 1947 ntBASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 AC005034.1-201ENST00000426657 489 ntBASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 BASP1P1-201ENST00000430708 665 ntBASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 AC055876.3-201ENST00000431496 288 ntBASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 AC140658.5-201ENST00000438532 169 ntBASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 AC069335.1-201ENST00000489972 472 ntBASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 AC051619.7-201ENST00000568314 623 ntBASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 AC138649.4-201ENST00000612222 287 ntBASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 AL035252.4-201ENST00000624174 288 ntBASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RTCBQ9Y3I0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RTCBQ9Y3I0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 AC087163.2-201ENST00000457299 853 ntBASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 AC079140.1-201ENST00000508039 487 ntBASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 AL512356.2-201ENST00000546955 174 ntBASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RTCBQ9Y3I0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms